Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4121

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,953,178	-				-2.1
4,953,331	-				+1.5
4,953,337	-				+1.6
4,953,337	-				+1.1
4,953,348	+				+1.0
4,953,348	+				+1.6
4,953,374	+		Shewana3_4121	0.11	+1.0
4,953,385	+		Shewana3_4121	0.12	+1.0
4,953,443	+		Shewana3_4121	0.16	+1.4
4,953,446	-		Shewana3_4121	0.16	+1.4
4,953,513	-		Shewana3_4121	0.21	+0.6
4,953,605	-		Shewana3_4121	0.27	+1.2
4,954,046	+		Shewana3_4121	0.58	+1.2
4,954,052	+		Shewana3_4121	0.59	+1.3
4,954,104	+		Shewana3_4121	0.62	+1.4
4,954,112	-		Shewana3_4121	0.63	+1.6
4,954,112	-		Shewana3_4121	0.63	+1.2
4,954,112	-		Shewana3_4121	0.63	+1.4
4,954,264	-		Shewana3_4121	0.73	+1.3
4,954,275	+		Shewana3_4121	0.74	+1.5
4,954,275	+		Shewana3_4121	0.74	+1.6
4,954,283	-		Shewana3_4121	0.75	+2.0
4,954,283	-		Shewana3_4121	0.75	+1.5
4,954,417	-		Shewana3_4121	0.84	+0.9
4,954,574	-				+1.3
4,954,575	-				+1.1
4,954,582	+				+1.8
4,954,659	-				-2.2
4,954,659	-				-0.1
4,954,761	+				-0.7
4,954,769	-				+0.7
4,955,087	-				-3.1
4,955,127	+				-1.0
4,955,140	-				-0.9
4,955,242	+				+1.0
4,955,303	-		Shewana3_4123	0.11	-1.0
4,955,359	-		Shewana3_4123	0.17	-1.9
4,955,414	-		Shewana3_4123	0.23	-1.9
4,955,431	-		Shewana3_4123	0.25	-2.7
4,955,624	+		Shewana3_4123	0.47	+0.1