Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4118

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,941,184	+		Shewana3_4117	0.33	+1.1
4,941,294	+		Shewana3_4117	0.44	-0.7
4,941,302	-		Shewana3_4117	0.45	-0.3
4,941,302	-		Shewana3_4117	0.45	+0.5
4,941,329	+		Shewana3_4117	0.48	+1.9
4,941,438	-		Shewana3_4117	0.59	+0.2
4,941,465	+		Shewana3_4117	0.61	-0.5
4,941,694	-		Shewana3_4117	0.84	-0.1
4,942,027	-				+0.7
4,942,109	-				+1.0
4,942,119	+				-0.8
4,942,167	-				-0.2
4,942,177	-				+1.5
4,942,534	+		Shewana3_4118	0.26	-0.9
4,942,614	-		Shewana3_4118	0.31	+0.3
4,942,617	+		Shewana3_4118	0.31	-0.3
4,942,630	+		Shewana3_4118	0.31	-1.8
4,942,638	-		Shewana3_4118	0.32	-0.6
4,942,741	+		Shewana3_4118	0.38	-1.0
4,942,861	-		Shewana3_4118	0.44	-0.2
4,942,953	+		Shewana3_4118	0.49	-0.1
4,943,116	-		Shewana3_4118	0.58	-0.9
4,943,182	+		Shewana3_4118	0.62	+0.3
4,943,192	-		Shewana3_4118	0.63	-0.3
4,943,192	-		Shewana3_4118	0.63	-0.7
4,943,192	-		Shewana3_4118	0.63	-0.5
4,943,279	-		Shewana3_4118	0.67	-0.2
4,943,306	+		Shewana3_4118	0.69	+1.2
4,943,329	+		Shewana3_4118	0.70	-0.7
4,943,329	+		Shewana3_4118	0.70	+0.3
4,943,359	-		Shewana3_4118	0.72	-0.0
4,943,369	+		Shewana3_4118	0.72	-0.2
4,943,380	+		Shewana3_4118	0.73	-0.1
4,943,388	-		Shewana3_4118	0.73	+0.0
4,943,388	-		Shewana3_4118	0.73	+0.7
4,943,388	-		Shewana3_4118	0.73	+0.4
4,943,443	-		Shewana3_4118	0.76	-2.2
4,943,451	-		Shewana3_4118	0.77	+0.5
4,943,602	+		Shewana3_4118	0.85	+0.8
4,943,873	+				+0.2
4,943,873	+				-4.3
4,943,881	-				-2.8
4,943,989	-				-0.8
4,943,997	+				-0.3
4,944,005	-				-1.7
4,944,045	+				+0.8
4,944,066	+				+1.4
4,944,077	+		Shewana3_4119	0.11	+0.5
4,944,385	+		Shewana3_4119	0.41	+0.5
4,944,459	-		Shewana3_4119	0.48	+0.9