Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4101
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
---|---|---|---|---|---|
remove | |||||
4,922,612 | - | Shewana3_4100 | 0.21 | -1.8 | |
4,922,664 | + | Shewana3_4100 | 0.26 | -0.3 | |
4,922,671 | - | Shewana3_4100 | 0.27 | -0.1 | |
4,922,775 | + | Shewana3_4100 | 0.37 | -2.3 | |
4,922,792 | - | Shewana3_4100 | 0.39 | -2.6 | |
4,922,815 | + | Shewana3_4100 | 0.41 | +0.3 | |
4,922,815 | + | Shewana3_4100 | 0.41 | -3.4 | |
4,922,823 | - | Shewana3_4100 | 0.42 | -1.7 | |
4,922,970 | - | Shewana3_4100 | 0.56 | -1.5 | |
4,922,978 | + | Shewana3_4100 | 0.57 | -1.7 | |
4,923,044 | - | Shewana3_4100 | 0.63 | -2.6 | |
4,923,205 | + | Shewana3_4100 | 0.79 | -3.7 | |
4,923,364 | - | -1.2 | |||
4,923,449 | + | -2.4 | |||
4,923,470 | + | -3.1 |
Or see this region's nucleotide sequence