Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4097

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,918,308	+				-0.3
4,918,315	+				-1.2
4,918,316	-				-0.1
4,918,316	-				-1.1
4,918,323	-				+1.9
4,918,371	+				-0.1
4,918,371	+				-0.7
4,918,371	+				-0.5
4,918,379	-				-0.8
4,918,379	-				-1.4
4,918,379	-				-0.1
4,918,380	-				-1.0
4,918,380	-				-0.5
4,918,398	-				-1.5
4,918,399	+				-0.8
4,918,443	-				-2.7
4,918,468	+				-0.1
4,918,478	+				-0.9
4,918,478	+				+0.4
4,918,478	+				+0.3
4,918,486	-				-1.3
4,918,505	+				-0.9
4,918,513	-				+0.4
4,918,535	+		Shewana3_4096	0.11	-2.5
4,918,536	+		Shewana3_4096	0.11	-2.7
4,918,542	+		Shewana3_4096	0.12	+0.8
4,918,542	+		Shewana3_4096	0.12	-1.2
4,918,550	-		Shewana3_4096	0.13	-0.4
4,918,565	+		Shewana3_4096	0.15	-1.9
4,918,565	+		Shewana3_4096	0.15	-2.8
4,918,624	+		Shewana3_4096	0.23	+0.9
4,918,631	-		Shewana3_4096	0.24	-3.9
4,918,691	-		Shewana3_4096	0.32	-1.8
4,918,717	+		Shewana3_4096	0.36	-0.7
4,918,717	+		Shewana3_4096	0.36	-3.1
4,918,717	+		Shewana3_4096	0.36	-0.3
4,918,717	+		Shewana3_4096	0.36	-0.4
4,918,717	+		Shewana3_4096	0.36	-1.9
4,918,717	+		Shewana3_4096	0.36	-1.6
4,918,717	+		Shewana3_4096	0.36	-0.1
4,918,717	+		Shewana3_4096	0.36	-0.4
4,918,717	+		Shewana3_4096	0.36	-0.3
4,918,725	-		Shewana3_4096	0.37	-0.0
4,918,725	-		Shewana3_4096	0.37	-0.5
4,918,725	-		Shewana3_4096	0.37	-0.7
4,918,725	-		Shewana3_4096	0.37	-1.1
4,918,725	-		Shewana3_4096	0.37	-0.7
4,918,727	+		Shewana3_4096	0.37	+1.0
4,918,737	+		Shewana3_4096	0.38	-0.1
4,918,737	+		Shewana3_4096	0.38	-1.5
4,918,737	+		Shewana3_4096	0.38	-1.0
4,918,745	-		Shewana3_4096	0.40	-0.7
4,918,745	-		Shewana3_4096	0.40	-1.4
4,918,745	-		Shewana3_4096	0.40	-1.3
4,918,745	-		Shewana3_4096	0.40	-0.4
4,918,745	-		Shewana3_4096	0.40	-1.9
4,918,745	-		Shewana3_4096	0.40	-2.9
4,918,802	+		Shewana3_4096	0.47	+0.1
4,918,802	+		Shewana3_4096	0.47	-2.3
4,918,811	-		Shewana3_4096	0.49	-0.5
4,918,828	+		Shewana3_4096	0.51	-1.0
4,918,828	+		Shewana3_4096	0.51	-2.5
4,918,842	+		Shewana3_4096	0.53	-1.9
4,918,842	+		Shewana3_4096	0.53	-0.1
4,918,842	+		Shewana3_4096	0.53	-3.3
4,918,842	+		Shewana3_4096	0.53	-2.1
4,918,842	+		Shewana3_4096	0.53	-0.0
4,918,850	-		Shewana3_4096	0.54	+1.9
4,918,852	+		Shewana3_4096	0.54	-1.5
4,918,865	+		Shewana3_4096	0.56	+0.7
4,918,865	+		Shewana3_4096	0.56	-0.6
4,918,865	+		Shewana3_4096	0.56	-1.8
4,918,865	+		Shewana3_4096	0.56	+1.9
4,918,865	+		Shewana3_4096	0.56	-2.3
4,918,865	+		Shewana3_4096	0.56	-0.8
4,918,865	+		Shewana3_4096	0.56	+0.0
4,918,865	+		Shewana3_4096	0.56	-0.9
4,918,865	+		Shewana3_4096	0.56	-0.8
4,918,865	+		Shewana3_4096	0.56	-0.7
4,918,865	+		Shewana3_4096	0.56	-1.8
4,918,865	+		Shewana3_4096	0.56	-0.9
4,918,865	+		Shewana3_4096	0.56	+0.8
4,918,865	+		Shewana3_4096	0.56	-1.3
4,918,873	-		Shewana3_4096	0.57	+0.9
4,918,873	-		Shewana3_4096	0.57	-0.7
4,918,873	-		Shewana3_4096	0.57	-0.1
4,918,873	-		Shewana3_4096	0.57	-2.2
4,918,873	-		Shewana3_4096	0.57	-0.1
4,918,873	-		Shewana3_4096	0.57	-0.7
4,918,873	-		Shewana3_4096	0.57	+1.9
4,918,892	+		Shewana3_4096	0.60	-0.7
4,918,915	-		Shewana3_4096	0.63	-0.7
4,918,946	+		Shewana3_4096	0.67	-0.9
4,918,954	-		Shewana3_4096	0.68	-1.1
4,918,956	+		Shewana3_4096	0.68	-1.5
4,918,956	+		Shewana3_4096	0.68	-0.4
4,918,956	+		Shewana3_4096	0.68	-0.6
4,918,964	-		Shewana3_4096	0.70	+0.3
4,918,966	+		Shewana3_4096	0.70	-0.3
4,918,969	-		Shewana3_4096	0.70	-2.1
4,918,988	+		Shewana3_4096	0.73	-0.9
4,918,995	-		Shewana3_4096	0.74	+0.4
4,918,996	-		Shewana3_4096	0.74	-1.6
4,919,011	+		Shewana3_4096	0.76	-0.2
4,919,023	+		Shewana3_4096	0.78	-1.0
4,919,023	+		Shewana3_4096	0.78	-0.9
4,919,023	+		Shewana3_4096	0.78	-0.8
4,919,033	-		Shewana3_4096	0.79	-0.4
4,919,033	-		Shewana3_4096	0.79	-2.1
4,919,038	+		Shewana3_4096	0.80	+0.0
4,919,048	+		Shewana3_4096	0.81	-1.1
4,919,048	+		Shewana3_4096	0.81	-0.9
4,919,048	+		Shewana3_4096	0.81	-0.3
4,919,050	+		Shewana3_4096	0.81	-0.2
4,919,053	+		Shewana3_4096	0.82	-1.0
4,919,055	+		Shewana3_4096	0.82	-1.0
4,919,055	+		Shewana3_4096	0.82	-1.8
4,919,055	+		Shewana3_4096	0.82	+1.0
4,919,055	+		Shewana3_4096	0.82	-1.3
4,919,055	+		Shewana3_4096	0.82	-0.3
4,919,056	-		Shewana3_4096	0.82	+0.9
4,919,058	+		Shewana3_4096	0.82	-3.0
4,919,058	-		Shewana3_4096	0.82	+1.9
4,919,058	-		Shewana3_4096	0.82	-0.7
4,919,058	-		Shewana3_4096	0.82	-0.6
4,919,061	-		Shewana3_4096	0.83	+0.1
4,919,061	-		Shewana3_4096	0.83	-2.4
4,919,063	-		Shewana3_4096	0.83	-0.5
4,919,063	-		Shewana3_4096	0.83	-1.5
4,919,063	-		Shewana3_4096	0.83	-1.7
4,919,063	-		Shewana3_4096	0.83	-0.7
4,919,066	+		Shewana3_4096	0.84	-0.4
4,919,068	-		Shewana3_4096	0.84	-1.5
4,919,262	+				+0.3
4,919,347	-		Shewana3_4097	0.13	+0.5
4,919,354	+		Shewana3_4097	0.14	-0.5
4,919,354	+		Shewana3_4097	0.14	+0.9
4,919,354	+		Shewana3_4097	0.14	-1.3
4,919,354	+		Shewana3_4097	0.14	-0.6
4,919,362	-		Shewana3_4097	0.15	-0.6
4,919,362	-		Shewana3_4097	0.15	-1.0
4,919,362	-		Shewana3_4097	0.15	-1.0
4,919,362	-		Shewana3_4097	0.15	-0.6
4,919,362	-		Shewana3_4097	0.15	+0.7
4,919,362	-		Shewana3_4097	0.15	-0.5
4,919,390	-		Shewana3_4097	0.18	+0.4
4,919,391	-		Shewana3_4097	0.18	-0.0
4,919,391	-		Shewana3_4097	0.18	-0.3
4,919,391	-		Shewana3_4097	0.18	-0.7
4,919,437	-		Shewana3_4097	0.23	-0.9
4,919,452	+		Shewana3_4097	0.25	+1.9
4,919,452	+		Shewana3_4097	0.25	+1.0
4,919,454	+		Shewana3_4097	0.25	+1.9
4,919,454	+		Shewana3_4097	0.25	+1.6
4,919,454	+		Shewana3_4097	0.25	-0.7
4,919,454	+		Shewana3_4097	0.25	+0.3
4,919,460	-		Shewana3_4097	0.26	-0.2
4,919,460	-		Shewana3_4097	0.26	-0.5
4,919,460	-		Shewana3_4097	0.26	-0.5
4,919,462	-		Shewana3_4097	0.26	-1.4
4,919,462	-		Shewana3_4097	0.26	-1.1
4,919,462	-		Shewana3_4097	0.26	-2.4
4,919,462	-		Shewana3_4097	0.26	-0.1
4,919,462	-		Shewana3_4097	0.26	-0.4
4,919,462	-		Shewana3_4097	0.26	-0.6
4,919,462	-		Shewana3_4097	0.26	+0.3
4,919,529	-		Shewana3_4097	0.34	-0.6
4,919,540	+		Shewana3_4097	0.35	+0.3
4,919,540	+		Shewana3_4097	0.35	+0.9
4,919,540	+		Shewana3_4097	0.35	-0.1
4,919,540	+		Shewana3_4097	0.35	-0.1
4,919,540	+		Shewana3_4097	0.35	+0.9
4,919,540	+		Shewana3_4097	0.35	-0.1
4,919,540	+		Shewana3_4097	0.35	+0.9
4,919,540	+		Shewana3_4097	0.35	-1.7
4,919,540	+		Shewana3_4097	0.35	-0.4
4,919,540	+		Shewana3_4097	0.35	-2.7
4,919,540	+		Shewana3_4097	0.35	-3.1
4,919,540	+		Shewana3_4097	0.35	-1.9
4,919,540	+		Shewana3_4097	0.35	-1.7
4,919,540	+		Shewana3_4097	0.35	-0.7
4,919,540	+		Shewana3_4097	0.35	-0.6
4,919,540	+		Shewana3_4097	0.35	+1.9
4,919,540	+		Shewana3_4097	0.35	+0.3
4,919,540	+		Shewana3_4097	0.35	+0.3
4,919,540	+		Shewana3_4097	0.35	-2.0
4,919,540	+		Shewana3_4097	0.35	-1.7
4,919,540	+		Shewana3_4097	0.35	-0.5
4,919,540	+		Shewana3_4097	0.35	-1.0
4,919,540	+		Shewana3_4097	0.35	-1.6
4,919,540	+		Shewana3_4097	0.35	-0.5
4,919,540	+		Shewana3_4097	0.35	-0.9
4,919,542	+		Shewana3_4097	0.35	-0.9
4,919,548	-		Shewana3_4097	0.36	+1.4
4,919,548	-		Shewana3_4097	0.36	+0.3
4,919,548	-		Shewana3_4097	0.36	-1.2
4,919,548	-		Shewana3_4097	0.36	-0.2
4,919,548	-		Shewana3_4097	0.36	+0.7
4,919,548	-		Shewana3_4097	0.36	-0.3
4,919,548	-		Shewana3_4097	0.36	+0.6
4,919,548	-		Shewana3_4097	0.36	-0.3
4,919,548	-		Shewana3_4097	0.36	-0.9
4,919,548	-		Shewana3_4097	0.36	-0.1
4,919,548	-		Shewana3_4097	0.36	-1.0
4,919,548	-		Shewana3_4097	0.36	-0.1
4,919,548	-		Shewana3_4097	0.36	-0.1
4,919,548	-		Shewana3_4097	0.36	-1.0
4,919,548	-		Shewana3_4097	0.36	-1.5
4,919,548	-		Shewana3_4097	0.36	-0.4
4,919,548	-		Shewana3_4097	0.36	-0.2
4,919,548	-		Shewana3_4097	0.36	-0.5
4,919,548	-		Shewana3_4097	0.36	-0.9
4,919,548	-		Shewana3_4097	0.36	-0.9
4,919,548	-		Shewana3_4097	0.36	-1.3
4,919,548	-		Shewana3_4097	0.36	+0.3
4,919,548	-		Shewana3_4097	0.36	-0.5
4,919,548	-		Shewana3_4097	0.36	-0.7
4,919,548	-		Shewana3_4097	0.36	-0.4
4,919,548	-		Shewana3_4097	0.36	-1.0
4,919,548	-		Shewana3_4097	0.36	-0.8
4,919,548	-		Shewana3_4097	0.36	-0.8
4,919,548	-		Shewana3_4097	0.36	-1.1
4,919,548	-		Shewana3_4097	0.36	-0.3
4,919,548	-		Shewana3_4097	0.36	-0.8
4,919,548	-		Shewana3_4097	0.36	-0.9
4,919,548	-		Shewana3_4097	0.36	-0.7
4,919,548	-		Shewana3_4097	0.36	+0.4
4,919,548	-		Shewana3_4097	0.36	+0.1
4,919,548	-		Shewana3_4097	0.36	+0.3
4,919,548	-		Shewana3_4097	0.36	-0.3
4,919,548	-		Shewana3_4097	0.36	-1.4
4,919,548	-		Shewana3_4097	0.36	-0.1
4,919,548	-		Shewana3_4097	0.36	-0.2
4,919,548	-		Shewana3_4097	0.36	-0.6
4,919,548	-		Shewana3_4097	0.36	+0.3
4,919,548	-		Shewana3_4097	0.36	-1.0
4,919,548	-		Shewana3_4097	0.36	-1.1
4,919,548	-		Shewana3_4097	0.36	-2.5
4,919,548	-		Shewana3_4097	0.36	-0.9
4,919,548	-		Shewana3_4097	0.36	-0.0
4,919,548	-		Shewana3_4097	0.36	+0.0
4,919,548	-		Shewana3_4097	0.36	-0.4
4,919,548	-		Shewana3_4097	0.36	-0.0
4,919,548	-		Shewana3_4097	0.36	-0.4
4,919,548	-		Shewana3_4097	0.36	-0.6
4,919,548	-		Shewana3_4097	0.36	-0.6
4,919,550	+		Shewana3_4097	0.36	+1.9
4,919,595	-		Shewana3_4097	0.41	-1.0
4,919,597	+		Shewana3_4097	0.41	+1.9
4,919,597	+		Shewana3_4097	0.41	+0.9
4,919,605	-		Shewana3_4097	0.42	-0.8
4,919,605	-		Shewana3_4097	0.42	-0.3
4,919,605	-		Shewana3_4097	0.42	+0.5
4,919,658	+		Shewana3_4097	0.48	-0.1
4,919,660	+		Shewana3_4097	0.48	-1.5
4,919,660	+		Shewana3_4097	0.48	-1.3
4,919,660	+		Shewana3_4097	0.48	-2.7
4,919,660	+		Shewana3_4097	0.48	-1.1
4,919,660	+		Shewana3_4097	0.48	-1.6
4,919,660	+		Shewana3_4097	0.48	-1.7
4,919,660	+		Shewana3_4097	0.48	-2.0
4,919,660	+		Shewana3_4097	0.48	+1.9
4,919,668	-		Shewana3_4097	0.49	+0.6
4,919,668	-		Shewana3_4097	0.49	-1.2
4,919,668	-		Shewana3_4097	0.49	-0.4
4,919,668	-		Shewana3_4097	0.49	-0.3
4,919,668	-		Shewana3_4097	0.49	-1.9
4,919,668	-		Shewana3_4097	0.49	-0.2
4,919,668	-		Shewana3_4097	0.49	+0.1
4,919,676	-		Shewana3_4097	0.50	-0.4
4,919,688	+		Shewana3_4097	0.51	-1.6
4,919,701	+		Shewana3_4097	0.53	-0.5
4,919,701	+		Shewana3_4097	0.53	-2.0
4,919,701	+		Shewana3_4097	0.53	-2.0
4,919,701	+		Shewana3_4097	0.53	-2.7
4,919,701	+		Shewana3_4097	0.53	-0.1
4,919,701	+		Shewana3_4097	0.53	-1.9
4,919,709	-		Shewana3_4097	0.54	-0.4
4,919,709	-		Shewana3_4097	0.54	-0.6
4,919,709	-		Shewana3_4097	0.54	-2.7
4,919,710	-		Shewana3_4097	0.54	-0.5
4,919,716	+		Shewana3_4097	0.55	+1.9
4,919,735	-		Shewana3_4097	0.57	-1.8
4,919,749	-		Shewana3_4097	0.58	+0.3
4,919,828	-		Shewana3_4097	0.67	-4.0
4,919,830	+		Shewana3_4097	0.67	-0.6
4,919,835	+		Shewana3_4097	0.68	-0.9
4,919,835	+		Shewana3_4097	0.68	-2.2
4,919,843	-		Shewana3_4097	0.69	-1.5
4,919,844	-		Shewana3_4097	0.69	-0.6
4,919,844	-		Shewana3_4097	0.69	-1.0
4,919,855	+		Shewana3_4097	0.70	-0.4
4,919,855	+		Shewana3_4097	0.70	-0.4
4,919,859	+		Shewana3_4097	0.71	-0.2
4,919,863	-		Shewana3_4097	0.71	-1.1
4,919,863	-		Shewana3_4097	0.71	-1.3
4,919,867	-		Shewana3_4097	0.71	-0.9
4,919,867	-		Shewana3_4097	0.71	+0.6
4,919,903	+		Shewana3_4097	0.76	-2.1
4,919,903	+		Shewana3_4097	0.76	-0.8
4,919,903	+		Shewana3_4097	0.76	-1.6
4,919,903	+		Shewana3_4097	0.76	+0.4
4,919,903	+		Shewana3_4097	0.76	-0.8
4,919,903	+		Shewana3_4097	0.76	+1.9
4,919,903	+		Shewana3_4097	0.76	-0.9
4,919,911	-		Shewana3_4097	0.76	-1.6
4,919,911	-		Shewana3_4097	0.76	-0.1
4,919,911	-		Shewana3_4097	0.76	+0.2
4,919,911	-		Shewana3_4097	0.76	-1.4
4,919,911	-		Shewana3_4097	0.76	-0.4
4,919,913	+		Shewana3_4097	0.77	-1.0
4,919,913	+		Shewana3_4097	0.77	-2.3
4,919,913	+		Shewana3_4097	0.77	-1.7
4,919,913	+		Shewana3_4097	0.77	-2.5
4,919,913	+		Shewana3_4097	0.77	-1.6
4,919,913	+		Shewana3_4097	0.77	-2.3
4,919,913	+		Shewana3_4097	0.77	-0.7
4,919,913	+		Shewana3_4097	0.77	-2.6
4,919,913	+		Shewana3_4097	0.77	-0.1
4,919,913	+		Shewana3_4097	0.77	-0.1
4,919,913	+		Shewana3_4097	0.77	-2.1
4,919,913	+		Shewana3_4097	0.77	+0.1
4,919,913	+		Shewana3_4097	0.77	-2.6
4,919,913	+		Shewana3_4097	0.77	-2.4
4,919,913	+		Shewana3_4097	0.77	-1.3
4,919,921	-		Shewana3_4097	0.78	+1.1
4,919,921	-		Shewana3_4097	0.78	-0.3
4,919,921	-		Shewana3_4097	0.78	-0.2
4,919,921	-		Shewana3_4097	0.78	-0.6
4,919,921	-		Shewana3_4097	0.78	-0.2
4,919,921	-		Shewana3_4097	0.78	-0.8
4,919,921	-		Shewana3_4097	0.78	-0.5
4,919,921	-		Shewana3_4097	0.78	+0.4
4,919,921	-		Shewana3_4097	0.78	-0.1
4,919,921	-		Shewana3_4097	0.78	-0.7
4,919,921	-		Shewana3_4097	0.78	-1.2
4,919,921	-		Shewana3_4097	0.78	+0.3
4,919,921	-		Shewana3_4097	0.78	+0.1
4,919,921	-		Shewana3_4097	0.78	-0.1
4,919,922	-		Shewana3_4097	0.78	+1.9
4,919,922	-		Shewana3_4097	0.78	+0.2
4,919,922	-		Shewana3_4097	0.78	-0.3
4,919,933	+		Shewana3_4097	0.79	-2.8
4,919,936	-		Shewana3_4097	0.79	-1.3
4,919,940	+		Shewana3_4097	0.80	-0.3
4,919,940	+		Shewana3_4097	0.80	+0.9
4,919,941	-		Shewana3_4097	0.80	+1.0
4,919,948	-		Shewana3_4097	0.81	+0.4
4,919,956	+		Shewana3_4097	0.81	-0.5
4,920,035	+				-0.9
4,920,035	+				-1.5
4,920,043	-				-0.4
4,920,043	-				-0.8
4,920,043	-				-0.1
4,920,172	+				-1.5
4,920,180	+				-2.0
4,920,225	-				-1.5
4,920,230	+				-1.9
4,920,230	+				-1.3
4,920,230	+				-1.5
4,920,230	+				+0.2
4,920,230	+				-1.5
4,920,238	-				+0.2
4,920,238	-				-2.1
4,920,238	-				-1.1
4,920,238	-				-2.4
4,920,238	-				-1.9
4,920,238	-				+0.9
4,920,238	-				-2.8
4,920,238	-				-1.5
4,920,238	-				-0.1
4,920,269	-				-2.8
4,920,270	-				-0.6
4,920,278	+		Shewana3_4098	0.10	-1.8
4,920,278	+		Shewana3_4098	0.10	-2.0
4,920,283	+		Shewana3_4098	0.11	-1.7
4,920,286	-		Shewana3_4098	0.11	-2.1
4,920,286	-		Shewana3_4098	0.11	-1.6
4,920,288	+		Shewana3_4098	0.11	-0.0
4,920,288	+		Shewana3_4098	0.11	-2.1
4,920,372	-		Shewana3_4098	0.19	-2.2
4,920,379	-		Shewana3_4098	0.20	-1.9
4,920,394	-		Shewana3_4098	0.21	-2.6
4,920,456	-		Shewana3_4098	0.27	-1.1
4,920,458	+		Shewana3_4098	0.27	-1.4
4,920,516	-		Shewana3_4098	0.33	-1.6
4,920,581	+		Shewana3_4098	0.39	-3.0
4,920,589	-		Shewana3_4098	0.39	-2.2
4,920,589	-		Shewana3_4098	0.39	-1.7
4,920,589	-		Shewana3_4098	0.39	-1.0
4,920,617	+		Shewana3_4098	0.42	-1.7
4,920,635	-		Shewana3_4098	0.44	-1.4
4,920,662	+		Shewana3_4098	0.46	-2.9
4,920,670	-		Shewana3_4098	0.47	-1.6
4,920,702	-		Shewana3_4098	0.50	-1.7
4,920,702	-		Shewana3_4098	0.50	-3.9
4,920,702	-		Shewana3_4098	0.50	-1.5
4,920,702	-		Shewana3_4098	0.50	+0.1
4,920,757	-		Shewana3_4098	0.55	-0.9
4,920,891	+		Shewana3_4098	0.68	-1.7
4,920,899	-		Shewana3_4098	0.68	-1.2
4,920,959	-		Shewana3_4098	0.74	-1.4
4,920,983	-		Shewana3_4098	0.76	-1.6