Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3982

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,777,491	+				+1.1
4,777,536	+				+0.1
4,777,571	-		Shewana3_3980	0.14	-0.7
4,777,592	+		Shewana3_3980	0.19	+0.4
4,777,603	+		Shewana3_3980	0.21	-0.9
4,777,605	-		Shewana3_3980	0.21	-2.0
4,777,611	-		Shewana3_3980	0.23	-2.8
4,777,636	+		Shewana3_3980	0.28	+1.1
4,777,636	+		Shewana3_3980	0.28	+0.2
4,777,644	-		Shewana3_3980	0.30	-1.2
4,777,647	-		Shewana3_3980	0.30	-1.7
4,777,647	-		Shewana3_3980	0.30	-3.6
4,777,680	+		Shewana3_3980	0.37	+0.4
4,777,688	-		Shewana3_3980	0.39	-0.5
4,777,750	-		Shewana3_3980	0.52	-0.4
4,777,795	+		Shewana3_3980	0.61	-1.7
4,777,878	-		Shewana3_3980	0.79	-2.4
4,778,082	+				+1.7
4,778,095	-				-0.2
4,778,127	+				-1.3
4,778,299	-		Shewana3_3981	0.46	+0.3
4,778,301	+		Shewana3_3981	0.47	-1.0
4,778,372	-		Shewana3_3981	0.70	-0.9
4,778,456	+				+0.2
4,778,456	+				-0.1
4,778,456	+				+0.1
4,778,456	+				+0.9
4,778,456	+				-1.1
4,778,516	+				-0.3
4,778,516	+				-1.1
4,778,524	-				-0.6
4,778,565	-				-0.8
4,778,600	+				-2.1
4,778,675	+		Shewana3_3982	0.13	-0.7
4,778,722	-		Shewana3_3982	0.16	-0.5
4,778,829	-		Shewana3_3982	0.23	+0.1
4,778,890	-		Shewana3_3982	0.27	+0.1
4,779,227	+		Shewana3_3982	0.49	-0.6
4,779,378	+		Shewana3_3982	0.59	+0.1
4,779,427	+		Shewana3_3982	0.63	-0.9
4,779,435	-		Shewana3_3982	0.63	-0.6
4,779,609	+		Shewana3_3982	0.75	-0.8
4,779,646	+		Shewana3_3982	0.77	+0.1
4,779,646	+		Shewana3_3982	0.77	-0.5
4,779,646	+		Shewana3_3982	0.77	-0.7
4,779,646	+		Shewana3_3982	0.77	-0.7
4,779,646	+		Shewana3_3982	0.77	-0.6
4,779,646	+		Shewana3_3982	0.77	+0.1
4,779,654	-		Shewana3_3982	0.78	-0.2
4,779,654	-		Shewana3_3982	0.78	-0.5
4,779,663	+		Shewana3_3982	0.78	+0.5
4,779,671	-		Shewana3_3982	0.79	-0.9
4,779,863	+				-0.3
4,779,892	-				-0.6
4,779,928	+				+0.0
4,779,935	+				+0.2
4,779,968	-				+0.2
4,780,075	+				-0.7
4,780,190	+				-0.5
4,780,374	+		Shewana3_3983	0.12	-0.0
4,780,376	-		Shewana3_3983	0.12	-0.1
4,780,393	+		Shewana3_3983	0.13	+0.3
4,780,452	-		Shewana3_3983	0.15	-0.9
4,780,460	+		Shewana3_3983	0.15	-0.1
4,780,483	-		Shewana3_3983	0.16	+0.5
4,780,492	-		Shewana3_3983	0.16	-0.9
4,780,507	-		Shewana3_3983	0.16	-0.9
4,780,545	+		Shewana3_3983	0.17	+0.4
4,780,634	-		Shewana3_3983	0.20	-0.4
4,780,691	+		Shewana3_3983	0.22	+0.2
4,780,697	+		Shewana3_3983	0.22	-0.4
4,780,719	-		Shewana3_3983	0.23	-0.2
4,780,789	-		Shewana3_3983	0.25	+0.0
4,780,918	+		Shewana3_3983	0.29	+1.0
4,780,926	-		Shewana3_3983	0.30	+0.4
4,780,968	+		Shewana3_3983	0.31	+0.8