Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3593

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,315,126	+		Shewana3_3592	0.69	+0.0
4,315,134	-		Shewana3_3592	0.70	-1.6
4,315,134	-		Shewana3_3592	0.70	+0.5
4,315,165	-		Shewana3_3592	0.71	-1.2
4,315,211	-		Shewana3_3592	0.72	-1.1
4,315,353	-		Shewana3_3592	0.77	-2.1
4,315,411	+		Shewana3_3592	0.79	-0.4
4,315,438	+		Shewana3_3592	0.80	-0.1
4,315,467	+		Shewana3_3592	0.81	-0.6
4,315,467	+		Shewana3_3592	0.81	-1.3
4,315,487	+		Shewana3_3592	0.82	-0.3
4,315,494	-		Shewana3_3592	0.82	-2.0
4,315,558	-		Shewana3_3592	0.85	+1.0
4,315,641	-		Shewana3_3592	0.88	+0.1
4,315,690	+		Shewana3_3592	0.89	-0.4
4,315,691	+		Shewana3_3592	0.89	-0.2
4,315,756	+				-0.2
4,315,919	-				-0.9
4,315,940	-				-1.1
4,315,984	-				-0.2
4,316,032	-				+0.6
4,316,135	+				-1.0
4,316,143	-		Shewana3_3593	0.11	+0.8
4,316,169	+		Shewana3_3593	0.19	+0.2
4,316,183	+		Shewana3_3593	0.23	-0.5
4,316,227	+		Shewana3_3593	0.36	-0.8
4,316,235	-		Shewana3_3593	0.38	-0.1
4,316,249	+		Shewana3_3593	0.42	+0.9
4,316,257	-		Shewana3_3593	0.44	-0.3
4,316,257	-		Shewana3_3593	0.44	-0.9
4,316,421	+				-0.7
4,316,423	+				-0.2
4,316,527	+				+0.0
4,316,527	+				-0.4
4,316,576	-				+0.6
4,316,595	-				+0.0
4,316,614	-				+1.7
4,316,624	+				-0.4
4,316,691	+		Shewana3_3594	0.15	-2.4
4,316,697	+		Shewana3_3594	0.16	-0.8
4,316,794	-		Shewana3_3594	0.25	+1.2
4,316,827	-		Shewana3_3594	0.29	+0.3
4,317,074	-		Shewana3_3594	0.52	+0.7
4,317,122	+		Shewana3_3594	0.57	+0.6
4,317,342	+		Shewana3_3594	0.78	-2.2
4,317,350	-		Shewana3_3594	0.79	+0.5
4,317,364	+		Shewana3_3594	0.80	+1.8
4,317,396	+		Shewana3_3594	0.83	-0.5
4,317,404	-		Shewana3_3594	0.84	+0.2