Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3476

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,169,270	-		Shewana3_3475	0.53	+0.6
4,169,270	-		Shewana3_3475	0.53	-2.0
4,169,430	+		Shewana3_3475	0.66	-0.2
4,169,675	+		Shewana3_3475	0.85	+0.3
4,169,844	+				+0.4
4,169,884	+				+1.8
4,169,950	+				-0.9
4,169,958	+				+0.1
4,170,021	-				-1.5
4,170,092	-				+1.0
4,170,150	-				-0.3
4,170,158	-				+0.0
4,170,314	+	rihA	Shewana3_3476	0.16	+0.9
4,170,314	+	rihA	Shewana3_3476	0.16	+0.2
4,170,320	-	rihA	Shewana3_3476	0.17	+1.1
4,170,322	-	rihA	Shewana3_3476	0.17	-0.3
4,170,322	-	rihA	Shewana3_3476	0.17	-0.1
4,170,322	-	rihA	Shewana3_3476	0.17	+0.7
4,170,322	-	rihA	Shewana3_3476	0.17	-0.4
4,170,361	+	rihA	Shewana3_3476	0.21	+0.3
4,170,367	+	rihA	Shewana3_3476	0.22	+0.2
4,170,375	-	rihA	Shewana3_3476	0.22	-1.1
4,170,405	+	rihA	Shewana3_3476	0.26	-0.3
4,170,405	+	rihA	Shewana3_3476	0.26	-0.6
4,170,526	-	rihA	Shewana3_3476	0.38	-0.7
4,170,532	+	rihA	Shewana3_3476	0.39	-0.2
4,170,668	+	rihA	Shewana3_3476	0.53	-0.1
4,170,676	-	rihA	Shewana3_3476	0.54	-1.2
4,170,722	+	rihA	Shewana3_3476	0.59	+2.0
4,170,911	-	rihA	Shewana3_3476	0.78	-1.2
4,171,040	+				-0.2
4,171,074	+				+0.1
4,171,076	+				-0.1
4,171,213	+				+1.3
4,171,391	+		Shewana3_3477	0.28	-0.1
4,171,391	+		Shewana3_3477	0.28	-0.3
4,171,399	-		Shewana3_3477	0.29	-0.7
4,171,504	-		Shewana3_3477	0.40	+0.1
4,171,578	+		Shewana3_3477	0.49	-0.3
4,171,624	+		Shewana3_3477	0.54	-0.4
4,171,698	+		Shewana3_3477	0.62	+1.0
4,171,809	-		Shewana3_3477	0.74	-0.6
4,171,840	-		Shewana3_3477	0.77	+0.3
4,172,035	+				+0.5