Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3455

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,138,173	+		Shewana3_3454	0.31	-0.7
4,138,181	-		Shewana3_3454	0.32	+0.8
4,138,199	-		Shewana3_3454	0.33	+0.2
4,138,219	+		Shewana3_3454	0.35	-1.0
4,138,234	+		Shewana3_3454	0.36	-1.1
4,138,234	+		Shewana3_3454	0.36	-2.0
4,138,324	-		Shewana3_3454	0.42	+0.9
4,138,460	-		Shewana3_3454	0.51	+0.4
4,138,730	+		Shewana3_3454	0.70	-1.8
4,138,735	-		Shewana3_3454	0.71	+1.6
4,138,808	-		Shewana3_3454	0.76	-0.6
4,138,831	-		Shewana3_3454	0.77	-1.8
4,138,867	+		Shewana3_3454	0.80	-2.9
4,138,875	-		Shewana3_3454	0.80	-0.7
4,139,001	+		Shewana3_3454	0.89	-2.2
4,139,019	-				+1.6
4,139,185	-				-0.5
4,139,188	+				-0.4
4,139,196	-				+0.2
4,139,250	-				+0.5
4,139,288	+				+0.3
4,139,320	-				+0.6
4,139,336	+				+0.8
4,139,336	+				-0.6
4,139,344	-				+0.0
4,139,347	+				-0.9
4,139,347	+				-0.3
4,139,491	+		Shewana3_3455	0.17	-3.1
4,139,666	-		Shewana3_3455	0.26	+0.0
4,139,795	-		Shewana3_3455	0.32	-0.6
4,139,932	+		Shewana3_3455	0.39	-1.6
4,139,957	-		Shewana3_3455	0.40	+0.0
4,140,270	-		Shewana3_3455	0.56	-0.0
4,140,360	+		Shewana3_3455	0.61	-1.4
4,140,455	-		Shewana3_3455	0.66	-0.3
4,140,466	+		Shewana3_3455	0.66	-0.5
4,140,690	+		Shewana3_3455	0.78	+1.9
4,140,884	-		Shewana3_3455	0.87	-0.3
4,140,955	+				-0.2
4,140,955	+				-0.2
4,140,965	+				-2.0
4,140,965	+				-0.5
4,141,000	-				-0.2
4,141,092	-				+0.3
4,141,205	-				-0.7
4,141,205	-				-0.1
4,141,311	+		Shewana3_3456	0.14	+0.3
4,141,427	-		Shewana3_3456	0.24	-0.3
4,141,429	-		Shewana3_3456	0.24	+0.3
4,141,452	+		Shewana3_3456	0.26	+0.9
4,141,460	-		Shewana3_3456	0.26	+0.1
4,141,517	-		Shewana3_3456	0.31	+0.1
4,141,566	+		Shewana3_3456	0.35	+1.1
4,141,566	+		Shewana3_3456	0.35	+0.2
4,141,566	+		Shewana3_3456	0.35	+0.3
4,141,681	+		Shewana3_3456	0.44	+0.5
4,141,682	+		Shewana3_3456	0.44	-0.5
4,141,690	-		Shewana3_3456	0.45	+0.9
4,141,690	-		Shewana3_3456	0.45	-0.8
4,141,772	-		Shewana3_3456	0.52	-0.1
4,142,010	-		Shewana3_3456	0.71	-0.3