Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3406

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,073,953	+		Shewana3_3405	0.24	-0.3
4,073,953	+		Shewana3_3405	0.24	-2.2
4,073,968	+		Shewana3_3405	0.25	+1.1
4,073,983	+		Shewana3_3405	0.27	-0.6
4,073,986	-		Shewana3_3405	0.27	-0.8
4,073,991	-		Shewana3_3405	0.28	-1.9
4,074,086	+		Shewana3_3405	0.39	+2.4
4,074,270	-		Shewana3_3405	0.59	-1.0
4,074,569	+				+0.1
4,074,587	+				-0.1
4,074,681	+				-0.6
4,074,883	+				-2.3
4,074,978	+				-0.9
4,075,393	+		Shewana3_3406	0.36	-1.7
4,075,393	+		Shewana3_3406	0.36	-0.2
4,075,393	+		Shewana3_3406	0.36	-3.5
4,075,393	+		Shewana3_3406	0.36	-3.5
4,075,393	+		Shewana3_3406	0.36	-3.9
4,075,448	+		Shewana3_3406	0.40	-1.1
4,075,448	+		Shewana3_3406	0.40	-1.5
4,075,448	+		Shewana3_3406	0.40	-1.2
4,075,470	+		Shewana3_3406	0.42	-1.1
4,075,723	+		Shewana3_3406	0.61	-0.2
4,075,984	+		Shewana3_3406	0.81	-0.8
4,075,984	+		Shewana3_3406	0.81	-2.1
4,076,019	+		Shewana3_3406	0.84	-1.2
4,076,048	+		Shewana3_3406	0.86	-1.0
4,076,073	+		Shewana3_3406	0.88	-0.9
4,076,890	+	panB	Shewana3_3408	0.15	+1.2
4,077,047	+	panB	Shewana3_3408	0.34	+0.3
4,077,081	+	panB	Shewana3_3408	0.39	+1.2
4,077,163	+	panB	Shewana3_3408	0.49	+1.3