Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3373

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,042,999	+				-0.5
4,043,002	-				-0.2
4,043,262	+		Shewana3_3371	0.54	-2.6
4,043,269	+		Shewana3_3371	0.55	-0.4
4,043,380	-		Shewana3_3371	0.75	-1.8
4,043,384	+		Shewana3_3371	0.75	+0.5
4,043,490	-				-0.0
4,043,507	+				-0.3
4,043,569	+				+0.3
4,043,694	-		Shewana3_3372	0.46	-0.2
4,043,701	+		Shewana3_3372	0.48	+1.3
4,043,701	+		Shewana3_3372	0.48	-0.1
4,043,813	+		Shewana3_3372	0.80	-0.3
4,043,938	+				-2.2
4,044,055	+				+0.4
4,044,099	-				+0.4
4,044,314	+		Shewana3_3373	0.27	-0.7
4,044,356	-		Shewana3_3373	0.31	+0.0
4,044,435	+		Shewana3_3373	0.37	-2.5
4,044,454	-		Shewana3_3373	0.39	+0.4
4,044,675	-		Shewana3_3373	0.57	+0.7
4,044,679	+		Shewana3_3373	0.57	+0.7
4,045,087	-				+0.8
4,045,101	+				-0.8
4,045,134	+				-2.0
4,045,158	+				+0.8
4,045,158	+				-0.2
4,045,280	-				+0.4
4,045,338	-		Shewana3_3374	0.15	-0.3
4,045,515	+		Shewana3_3374	0.44	-1.2
4,045,679	-		Shewana3_3374	0.71	+0.1
4,045,704	-		Shewana3_3374	0.75	-0.7
4,045,711	-		Shewana3_3374	0.76	-0.3
4,045,839	+				+0.1
4,045,995	+		Shewana3_3375	0.21	-2.5
4,046,058	-		Shewana3_3375	0.31	-0.6
4,046,069	-		Shewana3_3375	0.33	+0.6
4,046,148	-		Shewana3_3375	0.45	-0.1