Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3326

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,986,544	-				-0.6
3,986,640	+				+0.7
3,986,789	-		Shewana3_3325	0.28	-3.2
3,986,932	+		Shewana3_3325	0.53	-0.0
3,986,980	+		Shewana3_3325	0.62	+0.5
3,986,988	-		Shewana3_3325	0.63	-3.6
3,986,988	-		Shewana3_3325	0.63	-0.2
3,987,096	+		Shewana3_3325	0.82	-0.5
3,987,096	+		Shewana3_3325	0.82	-0.8
3,987,168	-				-0.5
3,987,354	+				-1.5
3,987,371	+				+1.2
3,987,371	+				-0.0
3,987,371	+				+0.4
3,987,379	-				-1.6
3,987,384	-				-1.4
3,987,667	+		Shewana3_3326	0.15	+0.7
3,987,932	+		Shewana3_3326	0.32	+1.6
3,987,940	-		Shewana3_3326	0.32	-0.3
3,988,118	+		Shewana3_3326	0.44	+0.4
3,988,293	+		Shewana3_3326	0.55	+0.5
3,988,341	+		Shewana3_3326	0.58	+0.2
3,988,349	-		Shewana3_3326	0.58	-2.7
3,988,349	-		Shewana3_3326	0.58	-2.6
3,988,349	-		Shewana3_3326	0.58	-2.2
3,988,354	-		Shewana3_3326	0.58	-1.2
3,988,440	-		Shewana3_3326	0.64	-0.9
3,988,451	+		Shewana3_3326	0.65	+0.5
3,988,451	+		Shewana3_3326	0.65	+0.2
3,988,475	+		Shewana3_3326	0.66	+1.0
3,988,701	-		Shewana3_3326	0.80	-0.7
3,988,715	+		Shewana3_3326	0.81	+0.4
3,988,859	-				-2.0
3,989,160	+		Shewana3_3327	0.19	+0.2
3,989,162	+		Shewana3_3327	0.19	-2.1
3,989,196	+		Shewana3_3327	0.27	-0.8
3,989,261	-		Shewana3_3327	0.43	-0.3
3,989,418	-		Shewana3_3327	0.80	-0.3
3,989,425	+		Shewana3_3327	0.82	+1.5
3,989,425	+		Shewana3_3327	0.82	+1.1
3,989,490	-				+0.0
3,989,580	+		Shewana3_3328	0.20	-0.3
3,989,791	-		Shewana3_3328	0.84	+0.9
3,989,852	+				-0.7
3,989,860	-				+0.1