Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3188

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,825,027	+		Shewana3_3186	0.68	-2.6
3,825,071	+		Shewana3_3186	0.82	+0.8
3,825,387	-		Shewana3_3187	0.19	+0.3
3,825,396	+		Shewana3_3187	0.21	-0.1
3,825,421	-		Shewana3_3187	0.26	+1.0
3,825,441	-		Shewana3_3187	0.29	-0.2
3,825,485	-		Shewana3_3187	0.37	-0.7
3,825,563	+		Shewana3_3187	0.52	-0.8
3,825,568	+		Shewana3_3187	0.53	+0.3
3,825,576	-		Shewana3_3187	0.54	-0.5
3,825,584	-		Shewana3_3187	0.56	+0.4
3,825,820	+				-0.2
3,825,825	+				+0.2
3,825,833	-				-0.5
3,826,082	-	cysM	Shewana3_3188	0.11	+1.2
3,826,136	+	cysM	Shewana3_3188	0.17	+1.3
3,826,136	+	cysM	Shewana3_3188	0.17	+0.2
3,826,136	+	cysM	Shewana3_3188	0.17	+0.5
3,826,326	-	cysM	Shewana3_3188	0.38	-0.2
3,826,336	-	cysM	Shewana3_3188	0.39	-2.0
3,826,542	+	cysM	Shewana3_3188	0.63	-1.9
3,826,550	-	cysM	Shewana3_3188	0.64	+0.8
3,826,560	+	cysM	Shewana3_3188	0.65	+0.8
3,826,675	-	cysM	Shewana3_3188	0.78	-0.2
3,826,724	-	cysM	Shewana3_3188	0.84	-0.7
3,826,731	+	cysM	Shewana3_3188	0.84	+1.2
3,826,755	+	cysM	Shewana3_3188	0.87	-2.9
3,826,763	-	cysM	Shewana3_3188	0.88	-0.2
3,826,765	-	cysM	Shewana3_3188	0.88	+0.5
3,826,841	+				-1.9
3,827,208	-		Shewana3_3189	0.13	-1.0
3,827,282	+		Shewana3_3189	0.21	+0.8
3,827,282	+		Shewana3_3189	0.21	+0.4
3,827,287	+		Shewana3_3189	0.21	+0.7
3,827,290	-		Shewana3_3189	0.21	+0.3
3,827,420	+		Shewana3_3189	0.34	+0.6
3,827,564	+		Shewana3_3189	0.49	+0.6
3,827,564	+		Shewana3_3189	0.49	+0.3
3,827,564	+		Shewana3_3189	0.49	+0.4
3,827,610	+		Shewana3_3189	0.53	-0.8