Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2961

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,554,805	-		Shewana3_2960	0.45	-1.8
3,554,805	-		Shewana3_2960	0.45	-0.7
3,554,885	-		Shewana3_2960	0.50	+0.1
3,554,976	+		Shewana3_2960	0.55	-0.8
3,554,983	-		Shewana3_2960	0.55	-0.1
3,554,984	-		Shewana3_2960	0.55	-0.8
3,554,996	+		Shewana3_2960	0.56	+0.8
3,554,996	+		Shewana3_2960	0.56	-1.8
3,555,004	-		Shewana3_2960	0.57	+1.3
3,555,004	-		Shewana3_2960	0.57	+0.8
3,555,004	-		Shewana3_2960	0.57	+0.4
3,555,092	+		Shewana3_2960	0.62	-1.0
3,555,100	-		Shewana3_2960	0.62	+2.7
3,555,128	-		Shewana3_2960	0.64	-0.1
3,555,241	-		Shewana3_2960	0.70	+0.2
3,555,241	-		Shewana3_2960	0.70	-1.8
3,555,309	-		Shewana3_2960	0.74	-1.0
3,555,309	-		Shewana3_2960	0.74	-0.4
3,555,355	-		Shewana3_2960	0.77	-0.4
3,555,523	+		Shewana3_2960	0.86	+1.2
3,555,527	-		Shewana3_2960	0.86	-0.5
3,555,639	-				+1.1
3,555,706	-				+1.2
3,555,788	-				-3.2
3,555,877	-				-0.3
3,555,902	-				+0.6
3,556,087	+		Shewana3_2961	0.20	+0.0
3,556,095	-		Shewana3_2961	0.21	-0.3
3,556,166	+		Shewana3_2961	0.25	+2.8
3,556,204	-		Shewana3_2961	0.27	-1.1
3,556,304	+		Shewana3_2961	0.34	+0.5
3,556,312	-		Shewana3_2961	0.34	-0.2
3,556,336	+		Shewana3_2961	0.36	-2.3
3,556,344	-		Shewana3_2961	0.36	+1.8
3,556,466	-		Shewana3_2961	0.44	+0.2
3,556,545	+		Shewana3_2961	0.49	-2.1
3,556,572	+		Shewana3_2961	0.50	-0.8
3,556,666	-		Shewana3_2961	0.56	-0.4
3,556,858	-		Shewana3_2961	0.68	-1.1
3,556,865	-		Shewana3_2961	0.69	-0.6
3,556,865	-		Shewana3_2961	0.69	-1.2
3,556,944	+		Shewana3_2961	0.74	+1.8
3,556,947	-		Shewana3_2961	0.74	-1.4
3,557,027	-		Shewana3_2961	0.79	+0.0
3,557,034	+		Shewana3_2961	0.79	-0.4
3,557,042	-		Shewana3_2961	0.80	+0.2
3,557,100	-		Shewana3_2961	0.84	-0.6
3,557,454	-				+1.5
3,557,550	+				+1.8
3,557,588	-		Shewana3_2962	0.18	+0.7
3,557,807	-		Shewana3_2962	0.37	+0.9
3,557,984	-		Shewana3_2962	0.53	+1.5
3,558,225	-		Shewana3_2962	0.74	+0.1