Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2366
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
---|---|---|---|---|---|
remove | |||||
2,843,837 | + | -1.2 | |||
2,843,837 | + | +0.4 | |||
2,844,870 | - | rnhA | Shewana3_2366 | 0.13 | -1.2 |
2,845,080 | + | rnhA | Shewana3_2366 | 0.57 | +0.9 |
2,845,433 | - | Shewana3_2367 | 0.12 | -1.7 | |
2,845,438 | - | Shewana3_2367 | 0.13 | -1.4 | |
2,845,471 | - | Shewana3_2367 | 0.16 | -2.9 | |
2,845,506 | + | Shewana3_2367 | 0.20 | -0.0 |
Or see this region's nucleotide sequence