Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2310

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,776,192	-		Shewana3_2309	0.41	-0.5
2,776,307	+		Shewana3_2309	0.51	+1.0
2,776,467	-		Shewana3_2309	0.64	+0.3
2,776,477	-		Shewana3_2309	0.65	-1.5
2,776,538	+		Shewana3_2309	0.70	-0.8
2,776,545	+		Shewana3_2309	0.71	-0.0
2,776,626	+		Shewana3_2309	0.77	-1.5
2,776,626	+		Shewana3_2309	0.77	-0.5
2,776,634	-		Shewana3_2309	0.78	-0.8
2,776,634	-		Shewana3_2309	0.78	+0.2
2,776,662	+		Shewana3_2309	0.80	-0.0
2,776,670	-		Shewana3_2309	0.81	+0.0
2,776,757	-		Shewana3_2309	0.88	-0.5
2,776,800	+				-0.6
2,776,824	-				-1.3
2,776,835	+				+0.6
2,776,945	-				+0.6
2,776,966	+				-0.1
2,777,095	-				+0.6
2,777,095	-				+0.2
2,777,192	-		Shewana3_2310	0.11	+1.0
2,777,213	+		Shewana3_2310	0.12	+2.0
2,777,213	+		Shewana3_2310	0.12	-0.3
2,777,221	-		Shewana3_2310	0.13	+0.5
2,777,221	-		Shewana3_2310	0.13	-1.6
2,777,221	-		Shewana3_2310	0.13	+1.0
2,777,230	-		Shewana3_2310	0.14	+0.3
2,777,468	-		Shewana3_2310	0.32	+0.4
2,777,493	+		Shewana3_2310	0.34	+2.0
2,777,582	-		Shewana3_2310	0.41	-0.2
2,777,704	-		Shewana3_2310	0.51	+0.2
2,777,768	-		Shewana3_2310	0.56	+1.4
2,777,768	-		Shewana3_2310	0.56	+0.9
2,777,802	+		Shewana3_2310	0.59	-0.8
2,777,892	+		Shewana3_2310	0.66	-0.0
2,777,928	-		Shewana3_2310	0.69	-0.7
2,777,972	+		Shewana3_2310	0.72	+0.4
2,778,036	+		Shewana3_2310	0.77	+1.1
2,778,321	+				-0.7
2,778,433	+				-0.8
2,778,433	+				-1.5
2,778,433	+				-0.2
2,778,441	-				+2.0
2,778,441	-				-1.6
2,778,602	+				+2.2
2,778,635	+		Shewana3_2311	0.11	-0.3
2,778,649	-		Shewana3_2311	0.12	+0.4
2,778,658	-		Shewana3_2311	0.13	+1.0
2,778,856	+		Shewana3_2311	0.25	-1.8
2,778,995	-		Shewana3_2311	0.33	-0.6
2,779,169	-		Shewana3_2311	0.44	-1.5
2,779,191	+		Shewana3_2311	0.46	+1.6