Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2281

Experiment: methylglyoxal 0.004 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_2280 and Shewana3_2281 are separated by 78 nucleotidesShewana3_2281 and Shewana3_2282 are separated by 350 nucleotides Shewana3_2280: Shewana3_2280 - cysteine desulfurase (RefSeq), at 2,742,056 to 2,743,270 _2280 Shewana3_2281: Shewana3_2281 - BadM/Rrf2 family transcriptional regulator (RefSeq), at 2,743,349 to 2,743,810 _2281 Shewana3_2282: Shewana3_2282 - serine O-acetyltransferase (RefSeq), at 2,744,161 to 2,744,982 _2282 Position (kb) 2743 2744Strain fitness (log2 ratio) -1 0 1 2at 2743.531 kb on - strand, within Shewana3_2281at 2743.651 kb on - strand, within Shewana3_2281

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Per-strain Table

Position Strand Gene LocusTag Fraction methylglyoxal 0.004 vol%
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2,743,531 - Shewana3_2281 0.39 +2.2
2,743,651 - Shewana3_2281 0.65 +2.1

Or see this region's nucleotide sequence