Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2222

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,668,299	+		Shewana3_2220	0.61	-1.3
2,668,299	+		Shewana3_2220	0.61	+0.4
2,668,299	+		Shewana3_2220	0.61	-1.9
2,668,299	+		Shewana3_2220	0.61	+1.0
2,668,307	-		Shewana3_2220	0.61	-0.8
2,668,307	-		Shewana3_2220	0.61	+2.2
2,668,307	-		Shewana3_2220	0.61	+0.5
2,668,326	-		Shewana3_2220	0.63	+0.9
2,668,345	+		Shewana3_2220	0.64	+1.0
2,668,353	-		Shewana3_2220	0.64	-2.8
2,668,419	-		Shewana3_2220	0.68	-0.3
2,668,436	+		Shewana3_2220	0.69	+1.0
2,668,436	+		Shewana3_2220	0.69	+0.4
2,668,436	+		Shewana3_2220	0.69	-0.3
2,668,436	+		Shewana3_2220	0.69	+1.0
2,668,444	-		Shewana3_2220	0.70	+0.2
2,668,478	-		Shewana3_2220	0.72	+0.4
2,668,492	+		Shewana3_2220	0.72	+2.0
2,668,492	+		Shewana3_2220	0.72	+2.0
2,668,612	-		Shewana3_2220	0.79	+1.0
2,668,697	+		Shewana3_2220	0.84	-0.3
2,668,705	-		Shewana3_2220	0.85	+2.0
2,668,712	+		Shewana3_2220	0.85	+0.4
2,668,721	+		Shewana3_2220	0.86	+2.0
2,668,723	+		Shewana3_2220	0.86	+0.2
2,668,729	-		Shewana3_2220	0.86	+2.0
2,668,763	+		Shewana3_2220	0.88	+1.0
2,668,763	+		Shewana3_2220	0.88	+0.0
2,668,763	+		Shewana3_2220	0.88	-0.6
2,668,771	-		Shewana3_2220	0.89	+2.0
2,668,776	-		Shewana3_2220	0.89	+2.0
2,668,776	-		Shewana3_2220	0.89	+2.0
2,668,807	+				+2.0
2,668,815	-				+0.4
2,668,820	-				-1.4
2,668,843	+				+0.4
2,668,843	+				+1.0
2,668,843	+				-0.3
2,668,843	+				+0.4
2,668,843	+				+2.0
2,668,843	+				-1.2
2,668,843	+				+0.4
2,668,843	+				-2.6
2,668,843	+				+1.0
2,668,851	-				+0.4
2,668,851	-				+2.0
2,668,851	-				+2.0
2,668,851	-				+2.0
2,668,851	-				-1.0
2,668,851	-				+2.0
2,668,851	-				+2.0
2,668,851	-				+2.0
2,668,868	+				+0.4
2,668,869	+				+0.4
2,668,875	+				-0.8
2,668,875	+				+1.0
2,668,875	-				+0.4
2,668,875	-				+1.6
2,668,883	-				+1.0
2,668,883	-				+0.4
2,668,960	+				+2.0
2,668,978	-				+1.5
2,669,037	+		Shewana3_2221	0.26	-0.6
2,669,037	+		Shewana3_2221	0.26	-2.6
2,669,045	-		Shewana3_2221	0.29	+0.0
2,669,045	-		Shewana3_2221	0.29	+2.0
2,669,049	+		Shewana3_2221	0.30	-1.0
2,669,089	+		Shewana3_2221	0.44	-0.4
2,669,089	+		Shewana3_2221	0.44	+0.0
2,669,127	+		Shewana3_2221	0.56	-1.3
2,669,147	+		Shewana3_2221	0.63	-0.1
2,669,304	-				+2.0
2,669,360	+				-1.3
2,669,507	+		Shewana3_2222	0.21	-2.1
2,669,627	+		Shewana3_2222	0.31	-1.7
2,669,640	-		Shewana3_2222	0.33	-0.3
2,669,890	-		Shewana3_2222	0.55	+1.0
2,669,946	-		Shewana3_2222	0.60	+0.4
2,670,215	-		Shewana3_2222	0.83	+1.0
2,670,244	+		Shewana3_2222	0.86	+2.0
2,671,193	+		Shewana3_2223	0.19	-1.4
2,671,267	-		Shewana3_2223	0.22	+0.9