Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2207

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,648,229	+		Shewana3_2206	0.63	+0.4
2,648,280	-		Shewana3_2206	0.68	-0.2
2,648,284	+		Shewana3_2206	0.69	+0.1
2,648,318	+		Shewana3_2206	0.72	-0.8
2,648,318	+		Shewana3_2206	0.72	+2.0
2,648,479	+		Shewana3_2206	0.89	+0.4
2,648,487	-		Shewana3_2206	0.90	-0.8
2,648,534	+				-0.2
2,648,606	-				+0.4
2,649,081	-				+1.0
2,649,139	-				+0.9
2,649,185	-				+0.3
2,649,348	+				+0.0
2,649,454	+				+2.3
2,649,536	+		Shewana3_2207	0.11	+0.2
2,649,544	-		Shewana3_2207	0.12	+1.1
2,649,570	-		Shewana3_2207	0.12	-1.2
2,649,691	+		Shewana3_2207	0.17	-0.8
2,649,845	-		Shewana3_2207	0.22	-0.3
2,649,989	-		Shewana3_2207	0.27	-2.1
2,649,994	-		Shewana3_2207	0.27	+0.5
2,650,054	-		Shewana3_2207	0.30	-2.1
2,650,142	+		Shewana3_2207	0.33	-0.7
2,650,228	-		Shewana3_2207	0.36	-0.6
2,650,295	-		Shewana3_2207	0.38	+2.0
2,650,497	+		Shewana3_2207	0.45	-0.1
2,650,500	-		Shewana3_2207	0.45	+1.0
2,650,500	-		Shewana3_2207	0.45	+0.0
2,650,500	-		Shewana3_2207	0.45	+2.0
2,650,883	-		Shewana3_2207	0.59	-0.2
2,651,141	+		Shewana3_2207	0.68	+0.2
2,651,159	-		Shewana3_2207	0.69	+0.8
2,651,182	-		Shewana3_2207	0.69	+3.6
2,651,274	+		Shewana3_2207	0.73	+0.1
2,651,582	+		Shewana3_2207	0.83	+0.4
2,651,649	-		Shewana3_2207	0.86	+0.0
2,651,649	-		Shewana3_2207	0.86	-0.3
2,651,649	-		Shewana3_2207	0.86	-1.5
2,651,796	-				+0.0
2,651,935	+				+0.0
2,652,011	-				+0.4
2,652,116	+				+0.4
2,652,194	+				+0.4
2,652,352	-		Shewana3_2208	0.14	+2.0
2,652,376	+		Shewana3_2208	0.15	+2.3
2,652,391	-		Shewana3_2208	0.16	+1.2
2,652,529	+		Shewana3_2208	0.23	+1.0
2,652,694	-		Shewana3_2208	0.31	-1.2
2,652,828	-		Shewana3_2208	0.38	-1.0
2,652,876	-		Shewana3_2208	0.41	+0.0
2,652,876	-		Shewana3_2208	0.41	-1.6
2,652,940	-		Shewana3_2208	0.44	+1.0
2,653,012	-		Shewana3_2208	0.48	-0.8