Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2152
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,578,001 | - | -1.2 | |||
| 2,578,225 | + | +0.4 | |||
| 2,578,341 | + | -0.3 | |||
| 2,578,382 | - | Shewana3_2152 | 0.12 | +0.4 | |
| 2,578,566 | - | +1.0 | |||
| 2,578,617 | + | Shewana3_2152 | 0.39 | -1.2 | |
| 2,578,625 | - | Shewana3_2152 | 0.40 | +2.0 | |
| 2,578,945 | + | Shewana3_2152 | 0.77 | +0.4 | |
| 2,579,039 | + | Shewana3_2152 | 0.88 | -0.8 | |
| 2,579,180 | - | +1.0 | |||
| 2,579,611 | + | Shewana3_2153 | 0.20 | -0.1 | |
| 2,579,767 | - | Shewana3_2153 | 0.31 | +1.0 | |
| 2,580,109 | + | Shewana3_2153 | 0.55 | +0.6 |
Or see this region's nucleotide sequence