Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2038

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,440,047	-		Shewana3_2037	0.77	+1.9
2,440,082	+		Shewana3_2037	0.78	-2.2
2,440,115	+		Shewana3_2037	0.79	-0.7
2,440,116	+		Shewana3_2037	0.79	+0.3
2,440,116	+		Shewana3_2037	0.79	+1.3
2,440,116	+		Shewana3_2037	0.79	-0.9
2,440,124	-		Shewana3_2037	0.79	-0.4
2,440,153	+		Shewana3_2037	0.80	+0.9
2,440,154	+		Shewana3_2037	0.80	-1.4
2,440,154	+		Shewana3_2037	0.80	-0.4
2,440,162	-		Shewana3_2037	0.80	-0.1
2,440,213	+		Shewana3_2037	0.82	-0.1
2,440,221	-		Shewana3_2037	0.82	+0.9
2,440,489	+		Shewana3_2037	0.90	+0.9
2,440,492	+		Shewana3_2037	0.90	+1.9
2,440,497	+		Shewana3_2037	0.90	-0.9
2,440,497	+		Shewana3_2037	0.90	-1.9
2,440,520	+				+0.9
2,440,549	+				-1.7
2,440,551	-				+0.9
2,440,851	-				+1.9
2,441,002	-				+1.9
2,441,139	-				+1.9
2,441,231	+				+0.3
2,441,266	-				+0.9
2,441,403	+				+1.9
2,441,452	-				+1.9
2,441,499	-				+0.9
2,441,524	+		Shewana3_2038	0.10	+0.9
2,441,532	-		Shewana3_2038	0.10	+0.3
2,441,565	-		Shewana3_2038	0.11	+1.9
2,441,881	+		Shewana3_2038	0.16	-0.1
2,442,062	-		Shewana3_2038	0.19	+0.9
2,442,074	+		Shewana3_2038	0.19	-2.7
2,442,224	-		Shewana3_2038	0.21	+0.9
2,442,225	-		Shewana3_2038	0.21	-0.1
2,442,402	-		Shewana3_2038	0.24	+1.5
2,442,584	+		Shewana3_2038	0.27	+0.1
2,442,778	-		Shewana3_2038	0.30	-0.1
2,442,991	-		Shewana3_2038	0.33	+1.9
2,443,042	+		Shewana3_2038	0.34	+0.3
2,443,137	+		Shewana3_2038	0.36	-0.7
2,443,218	+		Shewana3_2038	0.37	+0.9
2,443,463	-		Shewana3_2038	0.41	+1.9
2,443,715	+		Shewana3_2038	0.45	-1.1
2,443,747	+		Shewana3_2038	0.45	+0.9
2,443,747	+		Shewana3_2038	0.45	+0.9
2,443,841	-		Shewana3_2038	0.47	-0.1
2,443,856	-		Shewana3_2038	0.47	+0.3
2,444,052	+		Shewana3_2038	0.50	+1.9
2,444,167	+		Shewana3_2038	0.52	+1.9
2,444,175	-		Shewana3_2038	0.52	+0.9
2,444,359	-		Shewana3_2038	0.55	+0.5
2,444,361	+		Shewana3_2038	0.55	+0.9
2,444,704	+		Shewana3_2038	0.60	-0.9
2,444,980	+		Shewana3_2038	0.65	+2.3
2,445,332	-				+1.9
2,445,373	-		Shewana3_2038	0.71	-0.9
2,445,455	+		Shewana3_2038	0.72	-0.7
2,445,530	+		Shewana3_2038	0.73	-1.1
2,445,928	-		Shewana3_2038	0.79	+0.9
2,446,053	-		Shewana3_2038	0.81	+0.3
2,446,140	+		Shewana3_2038	0.83	-2.1
2,446,140	+		Shewana3_2038	0.83	+1.7
2,446,173	+		Shewana3_2038	0.83	-1.2
2,446,173	+		Shewana3_2038	0.83	-0.9
2,446,310	+		Shewana3_2038	0.85	+0.4
2,446,510	+		Shewana3_2038	0.89	+1.9
2,446,511	+		Shewana3_2038	0.89	+1.5
2,446,511	+		Shewana3_2038	0.89	+1.5
2,446,591	-		Shewana3_2038	0.90	+0.3
2,446,604	+				+1.2
2,447,037	+				-1.1
2,447,092	+				+3.7
2,447,263	-				+0.9
2,447,592	-				+0.9
2,447,942	-				-0.1