Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1915

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,273,139	-				+0.5
2,273,540	+				+1.0
2,273,615	+				+1.0
2,273,621	-				+0.5
2,273,831	-				+2.0
2,273,886	+				-0.5
2,273,886	+				-1.0
2,273,886	+				+1.0
2,273,894	+				+1.6
2,273,905	-				-0.2
2,273,907	+				+0.5
2,273,920	+				-0.3
2,273,925	+				+1.0
2,273,926	+				+1.0
2,273,926	+				-0.3
2,273,991	+				-0.4
2,274,036	+				+0.3
2,274,043	+				+0.4
2,274,043	+				-0.5
2,274,043	+				+0.2
2,274,043	+				-2.2
2,274,051	-				-0.8
2,274,058	+				-0.4
2,274,058	+				-1.5
2,274,064	-				+1.0
2,274,066	-				+2.0
2,274,073	+				+1.0
2,274,073	+				-1.4
2,274,101	+				+0.9
2,274,319	+		Shewana3_1915	0.20	+2.0
2,274,329	+		Shewana3_1915	0.21	+1.0
2,274,338	+		Shewana3_1915	0.22	+0.5
2,274,427	-		Shewana3_1915	0.32	+1.0
2,274,432	-		Shewana3_1915	0.33	-2.2
2,274,445	+		Shewana3_1915	0.34	-0.5
2,274,490	+		Shewana3_1915	0.39	+0.6
2,274,490	+		Shewana3_1915	0.39	+0.0
2,274,498	-		Shewana3_1915	0.40	-0.3
2,274,498	-		Shewana3_1915	0.40	+1.0
2,274,498	-		Shewana3_1915	0.40	+0.5
2,274,499	+		Shewana3_1915	0.40	+1.0
2,274,604	+		Shewana3_1915	0.52	+0.5
2,274,646	-		Shewana3_1915	0.56	+1.0
2,274,655	+		Shewana3_1915	0.57	+1.0
2,274,655	+		Shewana3_1915	0.57	-0.1
2,274,655	+		Shewana3_1915	0.57	-0.8
2,274,671	+		Shewana3_1915	0.59	+0.3
2,274,682	+		Shewana3_1915	0.60	+0.5
2,274,683	+		Shewana3_1915	0.60	+1.0
2,274,683	+		Shewana3_1915	0.60	+0.0
2,274,683	+		Shewana3_1915	0.60	-2.4
2,274,683	+		Shewana3_1915	0.60	+1.8
2,274,691	-		Shewana3_1915	0.61	+0.5
2,274,691	-		Shewana3_1915	0.61	+1.0
2,274,757	+		Shewana3_1915	0.68	-0.3
2,274,784	+		Shewana3_1915	0.71	-0.1
2,274,792	-		Shewana3_1915	0.72	+2.0
2,274,827	+		Shewana3_1915	0.76	+1.2
2,274,913	-		Shewana3_1915	0.86	+0.5
2,274,936	+		Shewana3_1915	0.88	-2.5
2,274,955	+				-0.5
2,274,955	+				-2.2
2,274,955	+				-1.9
2,274,955	+				+0.1
2,274,955	+				+2.0
2,274,955	+				+1.5
2,274,963	-				+0.0
2,274,963	-				-0.3
2,274,963	-				+0.5
2,275,087	+				+0.0
2,275,087	+				+0.9
2,275,087	+				-0.3
2,275,116	-				-2.0
2,275,145	-				-0.5
2,275,171	-				+0.0
2,275,218	+				+1.7
2,275,275	-		Shewana3_1916	0.13	+0.0
2,275,354	-		Shewana3_1916	0.20	+1.7
2,275,556	+		Shewana3_1916	0.39	+1.0
2,275,645	+		Shewana3_1916	0.47	-0.8
2,275,645	+		Shewana3_1916	0.47	+0.8
2,275,653	-		Shewana3_1916	0.47	+1.0
2,275,655	+		Shewana3_1916	0.47	+0.8
2,275,658	-		Shewana3_1916	0.48	-0.7
2,275,905	+		Shewana3_1916	0.70	-0.3
2,275,905	+		Shewana3_1916	0.70	-1.0
2,275,984	+		Shewana3_1916	0.77	-1.1