Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1914

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,270,377	-				+1.1
2,270,397	-				+1.1
2,270,397	-				-0.5
2,270,402	+				-0.0
2,270,496	+				-1.4
2,270,551	+				-0.1
2,270,574	-				+1.1
2,270,574	-				+2.1
2,270,671	+				-0.9
2,270,674	-				+0.1
2,270,987	-		Shewana3_1914	0.11	+1.4
2,271,036	+		Shewana3_1914	0.13	+0.5
2,271,068	-		Shewana3_1914	0.14	+2.3
2,271,112	+		Shewana3_1914	0.16	+1.1
2,271,116	+		Shewana3_1914	0.16	+1.1
2,271,124	-		Shewana3_1914	0.16	-2.1
2,271,303	+		Shewana3_1914	0.23	+1.9
2,271,368	+		Shewana3_1914	0.25	-0.8
2,271,381	-		Shewana3_1914	0.26	+0.1
2,271,469	+		Shewana3_1914	0.29	+0.9
2,271,540	+		Shewana3_1914	0.32	-1.1
2,271,863	+		Shewana3_1914	0.44	+1.1
2,271,871	-		Shewana3_1914	0.44	-0.1
2,272,176	+		Shewana3_1914	0.55	+3.1
2,272,409	+		Shewana3_1914	0.64	+0.1
2,272,478	+		Shewana3_1914	0.67	+0.2
2,272,508	+		Shewana3_1914	0.68	+1.1
2,272,672	+		Shewana3_1914	0.74	-1.0
2,272,736	-		Shewana3_1914	0.76	+1.1
2,272,790	+		Shewana3_1914	0.78	-0.5
2,272,866	+		Shewana3_1914	0.81	+1.1
2,272,965	-		Shewana3_1914	0.85	-1.8
2,273,072	-		Shewana3_1914	0.89	+2.1
2,273,098	-		Shewana3_1914	0.90	+0.1
2,273,131	+				-1.3
2,273,139	-				+0.5
2,273,540	+				+1.0
2,273,615	+				+1.0
2,273,621	-				+0.5
2,273,831	-				+2.0
2,273,886	+				-0.5
2,273,886	+				-1.0
2,273,886	+				+1.0
2,273,894	+				+1.6
2,273,905	-				-0.2
2,273,907	+				+0.5
2,273,920	+				-0.3
2,273,925	+				+1.0
2,273,926	+				+1.0
2,273,926	+				-0.3
2,273,991	+				-0.4
2,274,036	+				+0.3
2,274,043	+				+0.4
2,274,043	+				-0.5
2,274,043	+				+0.2
2,274,043	+				-2.2
2,274,051	-				-0.8
2,274,058	+				-0.4
2,274,058	+				-1.5
2,274,064	-				+1.0
2,274,066	-				+2.0
2,274,073	+				+1.0
2,274,073	+				-1.4
2,274,101	+				+0.9
2,274,319	+		Shewana3_1915	0.20	+2.0
2,274,329	+		Shewana3_1915	0.21	+1.0
2,274,338	+		Shewana3_1915	0.22	+0.5