Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1825

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,159,544	-		Shewana3_1824	0.84	+0.4
2,159,571	-		Shewana3_1824	0.85	+0.1
2,159,581	-		Shewana3_1824	0.85	+0.3
2,159,626	+		Shewana3_1824	0.88	-0.8
2,159,694	-				+0.0
2,159,744	+				-1.8
2,159,744	+				+0.6
2,159,794	+				-0.3
2,159,861	+				-0.5
2,160,170	-				+2.0
2,160,443	-				+2.0
2,160,446	+				+0.1
2,160,452	+				-0.3
2,160,583	+				+1.4
2,160,591	-				-0.8
2,160,671	-				+0.4
2,160,671	-				+1.0
2,160,685	+				+0.7
2,160,685	+				+0.4
2,160,685	+				-1.4
2,160,685	+				+1.2
2,160,693	-				-0.3
2,160,693	-				+1.0
2,160,693	-				+0.0
2,160,777	-				-0.6
2,160,804	-		Shewana3_1825	0.10	+2.0
2,160,848	+		Shewana3_1825	0.11	+0.2
2,160,879	+		Shewana3_1825	0.12	+1.2
2,160,909	+		Shewana3_1825	0.13	+1.0
2,160,925	-		Shewana3_1825	0.14	+0.4
2,161,426	-		Shewana3_1825	0.30	+2.0
2,161,576	+		Shewana3_1825	0.34	+0.4
2,161,584	-		Shewana3_1825	0.34	+1.8
2,161,689	+		Shewana3_1825	0.38	-1.6
2,161,781	+		Shewana3_1825	0.41	-0.3
2,161,812	-		Shewana3_1825	0.42	+0.0
2,161,869	-		Shewana3_1825	0.43	-0.2
2,161,869	-		Shewana3_1825	0.43	+1.0
2,161,986	+		Shewana3_1825	0.47	-0.4
2,161,990	-		Shewana3_1825	0.47	-1.0
2,162,136	-		Shewana3_1825	0.52	-0.1
2,162,453	-		Shewana3_1825	0.62	+0.6
2,162,519	+		Shewana3_1825	0.64	+1.1
2,162,519	+		Shewana3_1825	0.64	+1.0
2,162,519	+		Shewana3_1825	0.64	+0.0
2,162,527	-		Shewana3_1825	0.64	-0.9
2,162,684	-		Shewana3_1825	0.69	+0.0
2,163,041	+		Shewana3_1825	0.80	+1.3
2,163,331	+		Shewana3_1825	0.89	+1.5
2,163,784	+		Shewana3_1826	0.13	-0.9
2,163,784	+		Shewana3_1826	0.13	+0.4
2,163,789	+		Shewana3_1826	0.13	-0.3
2,163,799	-		Shewana3_1826	0.15	-2.0
2,163,945	+		Shewana3_1826	0.36	+0.3
2,164,293	+		Shewana3_1826	0.86	+0.6
2,164,341	+				+1.0
2,164,437	-				+1.0
2,164,494	+				+1.0