Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1790

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,115,728	+		Shewana3_1789	0.45	+0.4
2,115,925	+		Shewana3_1789	0.77	+0.6
2,115,925	+		Shewana3_1789	0.77	-0.3
2,115,925	+		Shewana3_1789	0.77	+0.8
2,115,925	+		Shewana3_1789	0.77	-0.4
2,115,933	-		Shewana3_1789	0.78	-0.9
2,116,037	+				-0.2
2,116,113	-				-0.0
2,116,137	-				+0.6
2,116,320	+				+1.0
2,116,465	-				-0.9
2,116,546	+		Shewana3_1790	0.11	+0.8
2,116,914	+		Shewana3_1790	0.29	-0.9
2,117,235	+		Shewana3_1790	0.45	+1.0
2,117,235	+		Shewana3_1790	0.45	-0.2
2,117,254	+		Shewana3_1790	0.46	-0.2
2,117,332	+		Shewana3_1790	0.50	-0.6
2,117,355	+		Shewana3_1790	0.51	-1.3
2,117,588	-		Shewana3_1790	0.63	+1.0
2,117,627	-		Shewana3_1790	0.65	-0.4
2,117,724	-		Shewana3_1790	0.70	-0.4
2,117,804	+		Shewana3_1790	0.74	-0.4
2,117,812	-		Shewana3_1790	0.74	+0.5
2,118,155	+				-0.5
2,118,155	+				+0.1
2,118,270	+				-2.7
2,118,283	+				+0.1
2,118,712	-				-0.9
2,118,843	+				+0.9
2,118,966	-				-0.4
2,118,966	-				+1.0
2,118,976	-				+0.4
2,119,016	-				-0.4
2,119,032	+				+1.0
2,119,032	+				+0.4
2,119,040	-				-0.6
2,119,068	-				+1.0
2,119,147	+		Shewana3_1791	0.14	-1.5