Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1461

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,693,614	+	fadI	Shewana3_1460	0.30	-0.2
1,693,643	+	fadI	Shewana3_1460	0.32	+0.5
1,693,902	-	fadI	Shewana3_1460	0.52	-0.5
1,693,992	-	fadI	Shewana3_1460	0.59	-1.9
1,694,044	-	fadI	Shewana3_1460	0.63	+0.5
1,694,080	-	fadI	Shewana3_1460	0.66	-1.5
1,694,626	+				+0.2
1,694,670	+				-0.2
1,694,860	+	fadJ	Shewana3_1461	0.15	+0.1
1,694,927	-	fadJ	Shewana3_1461	0.18	-1.1
1,695,006	+	fadJ	Shewana3_1461	0.22	+0.0
1,695,006	+	fadJ	Shewana3_1461	0.22	-1.3
1,695,029	-	fadJ	Shewana3_1461	0.23	+0.8
1,695,606	+	fadJ	Shewana3_1461	0.50	-0.5
1,695,958	-	fadJ	Shewana3_1461	0.67	+0.8
1,695,978	+	fadJ	Shewana3_1461	0.68	+0.2
1,696,084	+	fadJ	Shewana3_1461	0.73	-1.5
1,696,351	+	fadJ	Shewana3_1461	0.85	-0.3
1,696,351	+	fadJ	Shewana3_1461	0.85	+0.7
1,696,409	-	fadJ	Shewana3_1461	0.88	-0.3
1,696,512	+				-0.6
1,696,518	+				+0.3
1,696,604	+				+0.0
1,696,612	-				+0.2
1,696,824	-				-0.2
1,696,835	-				-0.6
1,697,119	-				-0.5
1,697,120	+				+1.0
1,697,137	-				+1.8
1,697,222	+				-0.5
1,697,222	+				+0.8
1,697,230	-				+0.4
1,697,230	-				+1.6
1,697,230	-				+0.5
1,697,272	+				+1.8
1,697,280	-				-0.5
1,697,304	+				+1.8
1,697,311	-				+0.8
1,697,312	-				+0.8
1,697,312	-				+0.7