Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1398
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
---|---|---|---|---|---|
remove | |||||
1,613,050 | - | Shewana3_1397 | 0.74 | -0.3 | |
1,613,232 | + | -0.4 | |||
1,613,240 | - | +1.1 | |||
1,613,314 | + | +1.4 | |||
1,613,322 | - | +2.2 | |||
1,613,595 | - | +2.2 | |||
1,615,531 | + | -0.3 | |||
1,615,599 | - | Shewana3_1399 | 0.14 | -0.5 | |
1,615,687 | + | Shewana3_1399 | 0.28 | +0.2 | |
1,615,701 | - | Shewana3_1399 | 0.30 | +1.4 | |
1,615,771 | - | Shewana3_1399 | 0.41 | -0.6 | |
1,616,074 | + | Shewana3_1399 | 0.89 | +1.4 |
Or see this region's nucleotide sequence