Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1288

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,497,881	+		Shewana3_1286	0.23	+0.1
1,497,901	-		Shewana3_1286	0.26	-0.6
1,498,009	+		Shewana3_1286	0.40	-0.1
1,498,009	+		Shewana3_1286	0.40	-0.6
1,498,056	-		Shewana3_1286	0.47	-0.6
1,498,094	+		Shewana3_1286	0.52	-0.6
1,498,124	+		Shewana3_1286	0.56	-0.5
1,498,214	+		Shewana3_1286	0.68	-1.0
1,498,309	+		Shewana3_1286	0.81	+1.0
1,498,317	-		Shewana3_1286	0.82	+0.0
1,498,564	+		Shewana3_1287	0.31	+0.8
1,498,917	+				-1.8
1,498,917	+				+0.2
1,498,917	+				-1.3
1,498,917	+				+1.7
1,498,925	-		Shewana3_1288	0.10	+0.5
1,498,945	-		Shewana3_1288	0.12	-0.7
1,498,955	-		Shewana3_1288	0.13	-2.2
1,499,094	-		Shewana3_1288	0.23	-0.0
1,499,194	-		Shewana3_1288	0.30	-0.7
1,499,300	-		Shewana3_1288	0.38	-1.8
1,499,346	+		Shewana3_1288	0.41	-1.0
1,499,385	-		Shewana3_1288	0.44	+1.2
1,499,855	-		Shewana3_1288	0.78	+0.1
1,499,899	+		Shewana3_1288	0.81	-0.7
1,499,907	-		Shewana3_1288	0.81	-2.1
1,500,028	-				+1.3
1,500,092	+				-0.8
1,500,130	-				-0.2
1,500,217	-				+0.1
1,500,291	+		Shewana3_1289	0.16	+1.2
1,500,313	+		Shewana3_1289	0.19	+0.6
1,500,313	+		Shewana3_1289	0.19	-1.8
1,500,313	+		Shewana3_1289	0.19	+0.2
1,500,347	+		Shewana3_1289	0.24	+0.1
1,500,347	-		Shewana3_1289	0.24	+0.6
1,500,347	-		Shewana3_1289	0.24	+1.5
1,500,401	+		Shewana3_1289	0.31	+0.3
1,500,420	+		Shewana3_1289	0.34	-0.1
1,500,697	-		Shewana3_1289	0.73	-0.3
1,500,717	-		Shewana3_1289	0.76	+0.5
1,501,022	+		Shewana3_1290	0.14	+1.1
1,501,075	-		Shewana3_1290	0.19	+0.0
1,501,075	-		Shewana3_1290	0.19	-2.6