Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1037
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
---|---|---|---|---|---|
remove | |||||
1,211,405 | + | +0.4 | |||
1,211,931 | + | Shewana3_1036 | 0.64 | -1.5 | |
1,212,063 | + | Shewana3_1036 | 0.78 | +1.0 | |
1,212,606 | - | prfC | Shewana3_1037 | 0.16 | -1.6 |
1,212,654 | - | prfC | Shewana3_1037 | 0.19 | -1.0 |
1,212,950 | + | prfC | Shewana3_1037 | 0.37 | -2.6 |
1,213,134 | + | prfC | Shewana3_1037 | 0.49 | -2.3 |
1,213,430 | - | prfC | Shewana3_1037 | 0.68 | -0.8 |
1,213,592 | + | prfC | Shewana3_1037 | 0.78 | -3.7 |
1,214,184 | + | +0.8 | |||
1,214,199 | - | -1.7 | |||
1,214,523 | - | Shewana3_1038 | 0.42 | +1.5 | |
1,214,616 | - | Shewana3_1038 | 0.55 | +1.2 |
Or see this region's nucleotide sequence