Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0921

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,075,535	+		Shewana3_0919	0.70	+0.4
1,075,543	-		Shewana3_0919	0.71	-1.6
1,075,613	+		Shewana3_0919	0.79	+1.4
1,075,621	-		Shewana3_0919	0.80	+1.2
1,075,699	+		Shewana3_0919	0.88	+0.7
1,075,710	+		Shewana3_0919	0.90	-0.2
1,075,831	+				+1.0
1,076,019	+		Shewana3_0920	0.24	-0.4
1,076,025	+		Shewana3_0920	0.26	+0.4
1,076,033	-		Shewana3_0920	0.27	-0.2
1,076,033	-		Shewana3_0920	0.27	-0.0
1,076,171	+		Shewana3_0920	0.52	+0.6
1,076,179	-		Shewana3_0920	0.53	-0.8
1,076,218	+		Shewana3_0920	0.61	+1.0
1,076,218	+		Shewana3_0920	0.61	+0.2
1,076,218	+		Shewana3_0920	0.61	+1.3
1,076,218	+		Shewana3_0920	0.61	+0.6
1,076,218	+		Shewana3_0920	0.61	-0.9
1,076,218	+		Shewana3_0920	0.61	-0.5
1,076,218	+		Shewana3_0920	0.61	-0.7
1,076,226	-		Shewana3_0920	0.62	-0.2
1,076,226	-		Shewana3_0920	0.62	-0.6
1,076,226	-		Shewana3_0920	0.62	-1.0
1,076,251	+		Shewana3_0920	0.66	+2.0
1,076,261	-		Shewana3_0920	0.68	+1.5
1,076,423	+				+0.4
1,076,447	+				+1.2
1,076,600	-		Shewana3_0921	0.19	+0.6
1,076,695	+		Shewana3_0921	0.31	+1.1
1,076,703	+		Shewana3_0921	0.32	+0.3
1,076,717	+		Shewana3_0921	0.33	+0.3
1,076,717	+		Shewana3_0921	0.33	+0.0
1,076,725	-		Shewana3_0921	0.34	-0.3
1,076,882	+		Shewana3_0921	0.53	+0.2
1,077,428	+		Shewana3_0922	0.19	+0.6
1,077,491	-		Shewana3_0922	0.32	+0.2
1,077,491	-		Shewana3_0922	0.32	-2.5
1,077,507	-		Shewana3_0922	0.36	+0.2
1,077,526	+		Shewana3_0922	0.40	+0.6
1,077,560	-		Shewana3_0922	0.47	+1.2
1,077,728	-		Shewana3_0922	0.83	-0.8
1,077,789	+				+0.3
1,077,898	+				-0.3
1,078,247	+		Shewana3_0923	0.22	-0.9