Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0888

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,032,282	+				+1.0
1,032,388	-				+0.6
1,032,465	-				-0.9
1,032,530	+		Shewana3_0887	0.14	+1.2
1,032,548	+		Shewana3_0887	0.17	-0.9
1,032,765	+		Shewana3_0887	0.63	+0.2
1,032,765	+		Shewana3_0887	0.63	-0.0
1,032,799	+		Shewana3_0887	0.70	+0.3
1,032,820	+		Shewana3_0887	0.74	-1.1
1,032,838	-		Shewana3_0887	0.78	-1.6
1,033,007	-				-1.6
1,033,076	+				-1.1
1,033,293	+				+0.1
1,033,398	+		Shewana3_0888	0.16	-1.2
1,033,411	+		Shewana3_0888	0.16	-0.0
1,033,567	+		Shewana3_0888	0.27	-0.1
1,033,743	-		Shewana3_0888	0.39	-0.3
1,033,743	-		Shewana3_0888	0.39	-0.2
1,034,056	+		Shewana3_0888	0.60	+0.4
1,034,080	-		Shewana3_0888	0.62	+0.2
1,034,179	-		Shewana3_0888	0.68	-1.8
1,034,179	-		Shewana3_0888	0.68	-2.6
1,034,181	-		Shewana3_0888	0.69	-0.2
1,034,292	-		Shewana3_0888	0.76	-0.6
1,034,321	-		Shewana3_0888	0.78	+1.3
1,034,321	-		Shewana3_0888	0.78	+0.3
1,034,428	+		Shewana3_0888	0.85	+0.9
1,034,543	+				+1.8
1,034,638	+				+0.9
1,034,687	-				-0.2
1,034,727	-				+0.2
1,034,812	+				+0.5
1,034,875	-				-1.4
1,035,028	-				-3.8
1,035,065	+				+0.4
1,035,111	+	mdoD	Shewana3_0889	0.13	+0.5
1,035,125	-	mdoD	Shewana3_0889	0.13	+0.4
1,035,272	-	mdoD	Shewana3_0889	0.22	-1.4
1,035,282	-	mdoD	Shewana3_0889	0.23	-0.2
1,035,282	-	mdoD	Shewana3_0889	0.23	+1.2
1,035,331	-	mdoD	Shewana3_0889	0.26	-1.2
1,035,386	+	mdoD	Shewana3_0889	0.29	+0.1
1,035,442	-	mdoD	Shewana3_0889	0.32	-1.2
1,035,442	-	mdoD	Shewana3_0889	0.32	-0.2
1,035,547	-	mdoD	Shewana3_0889	0.39	-0.5
1,035,554	+	mdoD	Shewana3_0889	0.39	+1.1
1,035,562	-	mdoD	Shewana3_0889	0.39	-2.9
1,035,630	+	mdoD	Shewana3_0889	0.43	+1.0