Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt modB and Shewana3_0743 overlap by 1 nucleotides Shewana3_0743 and Shewana3_0744 are separated by 202 nucleotides Shewana3_0744 and Shewana3_0745 are separated by 16 nucleotides
Shewana3_0742: modB - molybdate ABC transporter permease protein (RefSeq), at 861,758 to 862,495
modB
Shewana3_0743: Shewana3_0743 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 862,495 to 863,280
_0743
Shewana3_0744: Shewana3_0744 - ModE family transcriptional regulator (RefSeq), at 863,483 to 864,262
_0744
Shewana3_0745: Shewana3_0745 - putative iron-sulfur cluster binding protein (RefSeq), at 864,279 to 865,460
_0745
Position (kb) 863
864
865 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 862.500 kb on - strand at 862.554 kb on - strand at 862.734 kb on - strand, within Shewana3_0743 at 862.894 kb on + strand, within Shewana3_0743 at 862.919 kb on - strand, within Shewana3_0743 at 862.938 kb on + strand, within Shewana3_0743 at 863.007 kb on - strand, within Shewana3_0743 at 863.029 kb on + strand, within Shewana3_0743 at 863.037 kb on - strand, within Shewana3_0743 at 863.040 kb on - strand, within Shewana3_0743 at 863.230 kb on + strand at 863.231 kb on - strand at 863.467 kb on - strand at 863.737 kb on + strand, within Shewana3_0744 at 863.923 kb on - strand, within Shewana3_0744 at 863.924 kb on - strand, within Shewana3_0744 at 864.047 kb on + strand, within Shewana3_0744 at 864.110 kb on - strand, within Shewana3_0744 at 864.206 kb on - strand at 864.471 kb on + strand, within Shewana3_0745 at 864.477 kb on + strand, within Shewana3_0745 at 864.479 kb on - strand, within Shewana3_0745 at 864.786 kb on - strand, within Shewana3_0745 at 864.820 kb on - strand, within Shewana3_0745 at 864.951 kb on + strand, within Shewana3_0745 at 865.149 kb on + strand, within Shewana3_0745 at 865.157 kb on - strand, within Shewana3_0745 at 865.157 kb on - strand, within Shewana3_0745
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.004 vol% remove 862,500 - -2.8 862,554 - -0.4 862,734 - Shewana3_0743 0.30 +0.2 862,894 + Shewana3_0743 0.51 +0.3 862,919 - Shewana3_0743 0.54 +0.8 862,938 + Shewana3_0743 0.56 -0.7 863,007 - Shewana3_0743 0.65 -0.6 863,029 + Shewana3_0743 0.68 -2.2 863,037 - Shewana3_0743 0.69 -0.2 863,040 - Shewana3_0743 0.69 +0.7 863,230 + +0.1 863,231 - +0.9 863,467 - +1.0 863,737 + Shewana3_0744 0.33 +0.3 863,923 - Shewana3_0744 0.56 -0.6 863,924 - Shewana3_0744 0.57 +0.5 864,047 + Shewana3_0744 0.72 +1.4 864,110 - Shewana3_0744 0.80 +0.4 864,206 - +0.1 864,471 + Shewana3_0745 0.16 -0.4 864,477 + Shewana3_0745 0.17 +1.0 864,479 - Shewana3_0745 0.17 -1.2 864,786 - Shewana3_0745 0.43 -0.8 864,820 - Shewana3_0745 0.46 +0.5 864,951 + Shewana3_0745 0.57 -1.0 865,149 + Shewana3_0745 0.74 -2.7 865,157 - Shewana3_0745 0.74 -3.8 865,157 - Shewana3_0745 0.74 -2.7
Or see this region's nucleotide sequence