Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0097

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
107,060	-		Shewana3_0095	0.89	+0.3
107,068	+		Shewana3_0095	0.89	-0.2
107,076	-		Shewana3_0095	0.89	-0.5
107,111	-				-1.4
107,111	-				-0.1
107,166	+				-0.3
107,174	-				-0.3
107,197	+				-0.8
107,203	+				-0.3
107,330	-				-0.1
107,572	+				-0.0
107,582	+				-0.5
107,582	+				-0.5
107,582	+				-1.5
107,582	+				-0.4
107,693	-		Shewana3_0096	0.34	+1.7
107,759	+		Shewana3_0096	0.49	-2.3
107,838	+		Shewana3_0096	0.68	-5.6
107,987	+				+0.5
108,027	-				+0.4
108,027	-				+0.3
108,075	-				+0.6
108,158	+		Shewana3_0097	0.20	+0.3
108,166	-		Shewana3_0097	0.21	+0.5
108,187	+		Shewana3_0097	0.23	+0.7
108,425	+		Shewana3_0097	0.55	+0.4
108,433	-		Shewana3_0097	0.56	+0.1
108,433	-		Shewana3_0097	0.56	-0.8
108,470	-		Shewana3_0097	0.61	+0.3
108,531	+		Shewana3_0097	0.69	-0.1
108,538	-		Shewana3_0097	0.70	+0.2
108,584	-		Shewana3_0097	0.77	-1.0
108,653	-		Shewana3_0097	0.86	+0.4
108,762	-				-0.1
108,816	+				-0.8
108,826	+				-0.4
108,826	+				-0.8
108,834	-				+0.5
108,834	-				-0.8
108,834	-				-0.6
108,850	-				-0.9
108,894	+				+1.1
108,894	+				+0.3
108,901	+				-0.8
108,902	-				-1.4
108,902	-				-0.5
108,909	-				-0.4
108,936	+				-0.8
108,936	+				+0.1
108,936	+				+0.9
108,944	-				+1.0
108,944	-				-1.6
108,944	-				+0.0
108,946	-				-0.3
109,039	+				-1.5
109,047	-				-0.1
109,047	-				-1.5
109,065	-				-0.3
109,065	-				-1.3
109,071	-				-1.6
109,071	-				-0.2
109,075	+				-0.4
109,075	+				-1.9
109,083	-				-0.4
109,086	+				-0.6
109,132	+				-0.8
109,132	-				-1.4
109,252	-				-2.3
109,288	+				-0.1
109,298	+				-0.3
109,305	-				-1.2
109,305	-				+0.3
109,305	-				+0.4
109,305	-				-0.7
109,305	-				-0.2
109,306	-				-1.2
109,358	+				-0.4
109,404	+				-0.1
109,413	+				+0.8
109,413	+				+0.0
109,413	+				+0.4
109,413	+				+2.3
109,413	+				+0.9
109,413	+				+1.6
109,413	+				-1.9
109,413	+				-0.4
109,413	+				-0.2
109,413	+				-0.1
109,413	+				+0.9
109,413	+				+0.1
109,413	+				+0.1
109,421	-				-0.5
109,421	-				-1.3
109,421	-				-1.8
109,421	-				-0.0
109,421	-				-0.4
109,421	-				-0.4
109,421	-				-1.3
109,421	-				-1.5
109,421	-				-0.1
109,442	-				+0.7
109,496	+				+0.0
109,533	+				+0.4
109,541	-				+0.0
109,581	+				+1.1
109,690	-		Shewana3_0098	0.19	-0.2
109,711	+		Shewana3_0098	0.20	-0.4