Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4369

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
257,344	+		Shewana3_4368	0.40	-4.5
257,471	-		Shewana3_4368	0.52	-2.0
258,148	+		Shewana3_4369	0.17	-0.7
258,200	+		Shewana3_4369	0.31	-1.0
258,206	-		Shewana3_4369	0.33	-0.7
258,208	-		Shewana3_4369	0.33	-1.4
258,208	-		Shewana3_4369	0.33	+0.3
258,208	-		Shewana3_4369	0.33	-0.3
258,217	+		Shewana3_4369	0.36	-1.7
258,228	-		Shewana3_4369	0.39	-0.3
258,269	+		Shewana3_4369	0.50	-0.3
258,385	+		Shewana3_4369	0.81	+0.3
258,396	+		Shewana3_4369	0.84	-0.5
258,421	+				-0.3
258,421	+				+0.7
258,456	+				+0.8
258,483	+				+0.6
258,483	+				-0.6
258,491	-				-0.3
258,497	+				+0.6
258,543	-				-0.6
258,590	+				+1.3
258,603	-				-0.9
258,607	-				-0.5
258,640	+				-2.2
258,640	+				+1.3
258,640	+				-2.8
258,648	-				-0.6
258,648	-				+1.0
258,648	-				-0.8
258,648	-				-3.4
258,648	-				-1.3
258,648	-				+1.0
258,648	-				-3.3
258,648	-				-0.5
258,648	-				+1.3
258,648	-				-1.7
258,648	-				-2.4
258,648	-				-0.3
258,648	-				+0.6
258,653	-				+0.1
258,664	+				+1.0
258,671	+				+1.3
258,671	+				+1.4
258,671	+				-0.7
258,671	+				+0.3
258,672	-				-1.4
258,679	-				-1.7
258,679	-				+0.4
258,679	-				-2.7
258,679	-				-2.8
258,679	-				+1.3
258,679	-				-0.9
258,679	-				-1.9
258,680	-				-0.8
258,702	+				+0.3
258,703	-		Shewana3_4370	0.11	-1.0
258,703	-		Shewana3_4370	0.11	-0.5
258,703	-		Shewana3_4370	0.11	-1.9
258,764	+		Shewana3_4370	0.21	+0.3
258,784	-		Shewana3_4370	0.25	-1.0
258,784	-		Shewana3_4370	0.25	+1.1
258,872	-		Shewana3_4370	0.40	-0.8
258,929	-		Shewana3_4370	0.50	-2.3
258,929	-		Shewana3_4370	0.50	+0.0
258,929	-		Shewana3_4370	0.50	+0.6
259,059	+		Shewana3_4370	0.72	-0.7
259,059	+		Shewana3_4370	0.72	-2.0
259,064	+		Shewana3_4370	0.73	-0.3
259,081	-		Shewana3_4370	0.76	-0.3
259,081	-		Shewana3_4370	0.76	-0.3
259,086	-		Shewana3_4370	0.77	-2.6
259,086	-		Shewana3_4370	0.77	-0.3
259,157	-		Shewana3_4370	0.89	+0.3
259,159	+		Shewana3_4370	0.89	+0.3
259,159	+		Shewana3_4370	0.89	-0.3
259,159	+		Shewana3_4370	0.89	+0.7
259,159	+		Shewana3_4370	0.89	-0.7
259,159	+		Shewana3_4370	0.89	+0.3
259,159	+		Shewana3_4370	0.89	+0.3
259,160	-		Shewana3_4370	0.89	+0.4
259,167	-				-2.5
259,167	-				-1.0
259,167	-				-1.7
259,167	-				-2.9
259,167	-				+1.4
259,167	-				+1.1
259,167	-				-1.3
259,167	-				-1.4
259,167	-				-2.0
259,167	-				-0.7
259,167	-				-0.3
259,167	-				-1.0
259,167	-				-1.0
259,167	-				+0.6
259,167	-				-1.5
259,167	-				-2.0
259,167	-				-1.5
259,167	-				+0.2
259,167	-				-3.8
259,167	-				-1.3
259,167	-				-2.2
259,167	-				-1.2
259,167	-				-1.5
259,168	-				+1.3
259,168	-				-1.3
259,226	-				+1.2
259,253	-				-0.9
259,334	+				+1.1
259,342	-				+2.0
259,429	-				-0.2
259,429	-				+0.2