Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4352

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
236,133	+		Shewana3_4351	0.25	+0.7
236,134	+		Shewana3_4351	0.25	+2.3
236,161	+		Shewana3_4351	0.28	-0.3
236,176	-		Shewana3_4351	0.29	+0.8
236,176	-		Shewana3_4351	0.29	+0.8
236,198	-		Shewana3_4351	0.32	-0.0
236,268	+		Shewana3_4351	0.39	-0.7
236,382	-		Shewana3_4351	0.51	+0.0
236,469	+		Shewana3_4351	0.60	+0.0
236,495	+		Shewana3_4351	0.63	+1.3
236,554	+		Shewana3_4351	0.69	-1.2
236,788	+				-0.7
236,788	+				-1.7
236,796	-				-0.2
236,796	-				+1.1
236,796	-				+0.2
236,796	-				-1.0
236,796	-				+1.3
236,797	-				-0.7
236,978	-				-0.9
236,979	-				-0.2
236,979	-				+0.2
236,979	-				-0.8
237,035	+				-0.3
237,188	-		Shewana3_4352	0.17	+0.8
237,221	+		Shewana3_4352	0.19	+0.5
237,229	-		Shewana3_4352	0.20	+0.1
237,258	-		Shewana3_4352	0.22	+0.0
237,424	+				+0.3
237,432	-		Shewana3_4352	0.33	-0.5
237,770	+		Shewana3_4352	0.54	-1.7
237,775	+		Shewana3_4352	0.55	-1.9
237,882	-		Shewana3_4352	0.61	+1.8
237,891	+		Shewana3_4352	0.62	+1.3
237,891	+		Shewana3_4352	0.62	+0.7
237,892	+		Shewana3_4352	0.62	-1.0
237,899	-		Shewana3_4352	0.62	+0.6
237,917	-		Shewana3_4352	0.64	+1.3
237,927	-		Shewana3_4352	0.64	-0.9
237,945	-		Shewana3_4352	0.65	-0.2
237,995	+		Shewana3_4352	0.69	-0.9
238,003	-		Shewana3_4352	0.69	-0.4
238,004	-		Shewana3_4352	0.69	+0.4
238,041	+		Shewana3_4352	0.72	-0.7
238,041	+		Shewana3_4352	0.72	+0.3
238,041	+		Shewana3_4352	0.72	+1.3
238,041	+		Shewana3_4352	0.72	-1.9
238,049	-		Shewana3_4352	0.72	+0.7
238,049	-		Shewana3_4352	0.72	-0.3
238,117	-		Shewana3_4352	0.76	+0.9
238,231	+		Shewana3_4352	0.84	+0.3
238,231	+		Shewana3_4352	0.84	-2.8
238,239	-		Shewana3_4352	0.84	-0.1
238,239	-		Shewana3_4352	0.84	+0.4
238,239	-		Shewana3_4352	0.84	+0.1
238,269	+		Shewana3_4352	0.86	-1.0
238,269	+		Shewana3_4352	0.86	-0.7
238,269	+		Shewana3_4352	0.86	-1.3
238,277	-		Shewana3_4352	0.87	+0.0
238,277	-		Shewana3_4352	0.87	-0.4
238,277	-		Shewana3_4352	0.87	-0.4
238,277	-		Shewana3_4352	0.87	-1.1
238,277	-		Shewana3_4352	0.87	-1.0
238,437	-				+0.3
238,624	+		Shewana3_4353	0.37	+1.3
238,669	-		Shewana3_4353	0.48	+1.3
238,789	-		Shewana3_4353	0.79	+0.1
238,791	-		Shewana3_4353	0.79	-0.6
238,791	-		Shewana3_4353	0.79	+0.3
238,824	-		Shewana3_4353	0.88	+0.2
239,029	-				+0.3
239,067	-				+0.6
239,261	+		Shewana3_4354	0.18	-0.7
239,373	+		Shewana3_4354	0.25	+1.3