Strain Fitness in Shewanella loihica PV-4 around Shew_3566

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
4,259,508	-		Shew_3565	0.72	+0.9
4,259,694	+		Shew_3565	0.78	+0.1
4,259,702	-		Shew_3565	0.78	-0.0
4,259,780	-		Shew_3565	0.81	-0.6
4,259,806	+		Shew_3565	0.82	-0.2
4,259,814	-		Shew_3565	0.82	+0.0
4,260,043	-		Shew_3565	0.89	+0.6
4,260,043	-		Shew_3565	0.89	-0.3
4,260,102	+				+1.7
4,260,123	+				+0.5
4,260,149	-				-0.1
4,260,159	-				-0.2
4,260,445	+				+0.2
4,260,734	-		Shew_3566	0.27	+0.4
4,260,906	-		Shew_3566	0.41	+0.2
4,261,025	-		Shew_3566	0.50	-0.8
4,261,032	+		Shew_3566	0.50	+0.3
4,261,032	+		Shew_3566	0.50	+0.2
4,261,032	+		Shew_3566	0.50	+0.2
4,261,040	-		Shew_3566	0.51	+0.1
4,261,323	-		Shew_3566	0.72	+0.2
4,261,406	+		Shew_3566	0.79	+0.9
4,261,424	-		Shew_3566	0.80	-0.6
4,261,435	-		Shew_3566	0.81	-0.0
4,261,542	+		Shew_3566	0.89	+1.2
4,261,552	-		Shew_3566	0.90	-0.3
4,261,565	+				+0.2
4,261,776	-		Shew_3567	0.15	-0.5
4,261,840	+		Shew_3567	0.25	-0.5
4,261,967	+		Shew_3567	0.44	+0.1
4,262,017	-		Shew_3567	0.52	-0.2
4,262,320	-				+1.3
4,262,469	-				-0.3
4,262,586	+		Shew_3568	0.14	+0.3