Strain Fitness in Shewanella loihica PV-4 around Shew_3449

Experiment: Ceftazidime 5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntlpxC and Shew_3449 are separated by 178 nucleotidesShew_3449 and Shew_3450 are separated by 34 nucleotides Shew_3448: lpxC - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (RefSeq), at 4,129,288 to 4,130,208 lpxC Shew_3449: Shew_3449 - cell division protein FtsZ (RefSeq), at 4,130,387 to 4,131,562 _3449 Shew_3450: Shew_3450 - cell division protein FtsA (RefSeq), at 4,131,597 to 4,132,832 _3450 Position (kb) 4130 4131 4132Strain fitness (log2 ratio) -2 -1 0 1at 4130.289 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ceftazidime 5 mg/ml
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4,130,289 - -1.8

Or see this region's nucleotide sequence