Strain Fitness in Shewanella loihica PV-4 around Shew_3394

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
4,041,991	-				+0.9
4,042,314	+				+0.8
4,042,314	+				-2.0
4,042,338	+		Shew_3393	0.10	-0.2
4,042,356	-		Shew_3393	0.14	-0.0
4,042,365	-		Shew_3393	0.16	-0.3
4,042,407	-		Shew_3393	0.25	-0.5
4,042,467	+		Shew_3393	0.38	+1.2
4,042,502	+		Shew_3393	0.46	-0.6
4,042,617	+		Shew_3393	0.71	+0.0
4,042,765	+				-0.2
4,042,773	-				-0.8
4,042,783	-				-0.2
4,042,805	-				+0.5
4,043,171	-		Shew_3394	0.23	-0.3
4,043,418	-		Shew_3394	0.53	-2.1
4,043,779	-				+0.6
4,044,196	+		Shew_3395	0.39	+0.1
4,044,350	-		Shew_3395	0.56	+0.5
4,044,415	+		Shew_3395	0.64	-0.2
4,044,424	+		Shew_3395	0.65	-0.5