Strain Fitness in Shewanella loihica PV-4 around Shew_3353

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,996,929	+		Shew_3352	0.11	-0.1
3,997,064	+		Shew_3352	0.24	+0.1
3,997,084	-		Shew_3352	0.26	+0.3
3,997,104	-		Shew_3352	0.28	+1.6
3,997,220	+		Shew_3352	0.40	+0.0
3,997,530	-		Shew_3352	0.70	+2.2
3,997,609	-		Shew_3352	0.78	-1.4
3,997,777	+				-0.3
3,998,088	+		Shew_3353	0.36	+0.1
3,998,205	-		Shew_3353	0.61	-0.5
3,998,211	-		Shew_3353	0.63	-0.4
3,998,554	-				+1.2
3,998,868	-				-0.4
3,998,906	+				+0.0
3,999,027	-		Shew_3354	0.12	+0.5
3,999,058	+		Shew_3354	0.14	+0.1
3,999,136	+		Shew_3354	0.17	-0.8
3,999,189	+		Shew_3354	0.19	+0.1
3,999,364	-		Shew_3354	0.27	+0.6
3,999,365	+		Shew_3354	0.27	-0.2