Strain Fitness in Shewanella loihica PV-4 around Shew_3120

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,707,119	-		Shew_3119	0.59	-0.2
3,707,480	+				-0.5
3,708,015	+				+1.1
3,708,166	+		Shew_3120	0.15	+0.7
3,708,364	-		Shew_3120	0.32	+1.3
3,708,409	-		Shew_3120	0.36	+0.7
3,708,409	-		Shew_3120	0.36	+0.5
3,708,619	+		Shew_3120	0.54	+0.8
3,708,761	+		Shew_3120	0.66	+0.6
3,708,930	+		Shew_3120	0.80	+1.5
3,709,090	-				+1.2
3,709,240	-				+0.4
3,709,326	+				+1.2
3,709,452	+		Shew_3121	0.27	+0.0
3,709,644	-		Shew_3121	0.64	+1.0
3,709,797	+				+0.6
3,709,860	-				+0.6
3,709,896	+				-2.0