Strain Fitness in Shewanella loihica PV-4 around Shew_2096

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,422,252	-		Shew_2095	0.62	+0.4
2,422,306	+		Shew_2095	0.66	+0.0
2,422,319	-		Shew_2095	0.66	-1.2
2,422,388	-		Shew_2095	0.70	+0.2
2,422,398	-		Shew_2095	0.71	-0.5
2,422,408	+		Shew_2095	0.71	-0.0
2,422,593	+		Shew_2095	0.82	+0.3
2,422,663	+		Shew_2095	0.86	+1.8
2,422,663	+		Shew_2095	0.86	-1.5
2,422,663	+		Shew_2095	0.86	-0.2
2,423,079	-				-0.4
2,423,192	-		Shew_2096	0.14	+0.7
2,423,192	-		Shew_2096	0.14	+2.4
2,424,059	+		Shew_2096	0.56	+0.9
2,424,482	-		Shew_2096	0.77	-0.1
2,424,748	+		Shew_2096	0.90	+0.9
2,424,748	+		Shew_2096	0.90	+0.1
2,425,031	+				-0.1
2,425,241	+				-1.0
2,425,241	+				-0.3
2,425,241	+				-0.2
2,425,249	-				-0.3
2,425,249	-				+0.5
2,425,400	+				-0.1