Strain Fitness in Shewanella loihica PV-4 around Shew_1170

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,349,916	+		Shew_1169	0.64	-0.4
1,350,149	-		Shew_1169	0.74	+0.7
1,350,401	-		Shew_1169	0.86	-1.4
1,350,430	+		Shew_1169	0.87	-1.6
1,350,502	+				-0.0
1,350,555	+				+0.1
1,350,647	+				+0.5
1,350,673	-				-1.5
1,350,706	+				-1.0
1,350,714	-				-0.1
1,350,714	-				+0.0
1,350,866	+				+0.4
1,350,902	-				+0.4
1,350,947	-				+0.4
1,351,016	+		Shew_1170	0.12	+0.6
1,351,179	-		Shew_1170	0.19	-0.1
1,351,311	+		Shew_1170	0.24	+0.3
1,351,409	+		Shew_1170	0.28	-0.1
1,351,524	+		Shew_1170	0.32	-1.4
1,351,590	+		Shew_1170	0.35	+0.3
1,351,682	+		Shew_1170	0.39	+0.4
1,351,929	-		Shew_1170	0.48	-0.7
1,351,936	-		Shew_1170	0.49	+0.7
1,352,116	+		Shew_1170	0.56	+2.1
1,352,153	-		Shew_1170	0.57	-0.5
1,352,153	-		Shew_1170	0.57	-0.7
1,352,547	+		Shew_1170	0.73	-0.2
1,352,577	-		Shew_1170	0.74	+0.8
1,352,730	+		Shew_1170	0.80	+0.8
1,352,738	-		Shew_1170	0.81	+0.0
1,353,677	+		Shew_1171	0.29	-1.3
1,354,126	-		Shew_1171	0.65	+0.5