Strain Fitness in Shewanella loihica PV-4 around Shew_1092

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,258,437	+		Shew_1091	0.80	-0.3
1,258,437	+		Shew_1091	0.80	+1.0
1,258,437	+		Shew_1091	0.80	+0.9
1,258,447	+		Shew_1091	0.80	-0.3
1,258,838	-				+1.9
1,259,325	+				+1.2
1,259,850	-		Shew_1092	0.34	+1.5
1,259,855	-		Shew_1092	0.35	+1.6
1,259,898	-		Shew_1092	0.38	+1.7
1,260,063	+		Shew_1092	0.49	+1.2
1,260,550	-		Shew_1092	0.82	+0.9
1,261,409	-		Shew_1093	0.59	-2.7
1,261,546	+		Shew_1093	0.77	+0.4
1,261,584	+		Shew_1093	0.82	-3.2
1,261,753	-				-0.1