Strain Fitness in Shewanella loihica PV-4 around Shew_1026

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,183,373	-		Shew_1024	0.22	+0.6
1,183,373	-		Shew_1024	0.22	-0.0
1,183,588	+		Shew_1024	0.57	+0.2
1,183,750	+		Shew_1024	0.83	-0.4
1,183,925	+		Shew_1025	0.18	+1.5
1,183,925	+		Shew_1025	0.18	+0.3
1,184,490	-		Shew_1026	0.13	-0.8
1,184,562	-		Shew_1026	0.21	+0.2
1,184,768	+		Shew_1026	0.42	-0.9
1,186,100	-				-1.6
1,186,157	+				-0.3
1,186,266	+				-0.0
1,186,307	+				-1.1
1,186,307	+				+0.2
1,186,310	-				-0.1