Strain Fitness in Shewanella loihica PV-4 around Shew_0106

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
115,619	+		Shew_0105	0.72	+0.4
115,763	-		Shew_0105	0.78	+0.1
115,854	-		Shew_0105	0.81	-1.4
116,013	-		Shew_0105	0.88	-0.3
116,037	-		Shew_0105	0.89	-0.1
116,093	+				+0.2
116,109	+				-0.2
116,119	+				+1.4
116,208	+				+0.0
116,208	+				-0.1
116,273	+				+0.2
116,275	+				+0.0
116,283	-				-0.4
116,283	+				-0.7
116,388	+				-0.0
116,441	+				-0.8
117,200	-				-0.2
117,364	-		Shew_0107	0.16	-0.5
117,395	+		Shew_0107	0.19	-2.4
117,544	-		Shew_0107	0.30	-0.4
117,687	+		Shew_0107	0.40	+0.5
117,898	+		Shew_0107	0.56	-1.1
117,898	+		Shew_0107	0.56	-1.0
117,969	+		Shew_0107	0.61	-0.7
117,998	+		Shew_0107	0.63	-0.9