Strain Fitness in Shewanella loihica PV-4 around Shew_0028

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
29,135	+		Shew_0026	0.56	+0.5
29,328	-				+1.1
29,371	-				-0.1
29,774	-		Shew_0027	0.61	-0.0
29,889	+		Shew_0027	0.78	-0.3
30,115	-				-0.7
30,128	-				+0.1
30,324	-		Shew_0028	0.24	-0.2
30,531	+		Shew_0028	0.47	-0.1
30,539	-		Shew_0028	0.48	-0.4
30,559	-		Shew_0028	0.50	+0.3
30,572	-		Shew_0028	0.51	+0.0
30,688	-		Shew_0028	0.64	+0.7
30,780	+		Shew_0028	0.74	+0.6
30,790	+		Shew_0028	0.76	-0.4
30,951	-				-0.1
31,272	-				+1.1
31,658	+		Shew_0029	0.61	+0.7
31,658	+		Shew_0029	0.61	-0.0
31,658	+		Shew_0029	0.61	-0.5
31,658	+		Shew_0029	0.61	-0.4
31,666	-		Shew_0029	0.62	+0.1
31,893	+				-0.2
31,908	-				-0.4
31,936	-				+0.0