Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5967

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
6,784,703	-		Pf6N2E2_5966	0.19	-0.0
6,784,751	+		Pf6N2E2_5966	0.25	+0.3
6,784,914	+		Pf6N2E2_5966	0.43	+0.6
6,784,914	+		Pf6N2E2_5966	0.43	-0.2
6,784,914	+		Pf6N2E2_5966	0.43	+1.1
6,784,915	-		Pf6N2E2_5966	0.43	-0.8
6,785,037	-		Pf6N2E2_5966	0.57	+0.0
6,785,037	-		Pf6N2E2_5966	0.57	+0.4
6,785,066	+		Pf6N2E2_5966	0.61	+0.3
6,785,077	+		Pf6N2E2_5966	0.62	+0.3
6,785,171	+		Pf6N2E2_5966	0.73	-0.6
6,785,171	+		Pf6N2E2_5966	0.73	+0.6
6,785,171	+		Pf6N2E2_5966	0.73	+0.1
6,785,172	-		Pf6N2E2_5966	0.73	-0.6
6,785,173	+		Pf6N2E2_5966	0.73	-0.1
6,785,173	+		Pf6N2E2_5966	0.73	+0.5
6,785,174	-		Pf6N2E2_5966	0.73	-0.8
6,785,174	-		Pf6N2E2_5966	0.73	+0.3
6,785,174	-		Pf6N2E2_5966	0.73	+1.1
6,785,306	+		Pf6N2E2_5966	0.88	+0.3
6,785,306	+		Pf6N2E2_5966	0.88	+0.0
6,785,307	-		Pf6N2E2_5966	0.88	-0.3
6,785,307	-		Pf6N2E2_5966	0.88	+0.2
6,785,307	-		Pf6N2E2_5966	0.88	-0.6
6,785,374	+				-0.6
6,785,376	+				+0.5
6,785,376	+				+0.3
6,785,376	+				+0.3
6,785,376	+				+0.4
6,785,376	+				-0.2
6,785,377	-				+0.0
6,785,377	-				+0.1
6,785,393	-				+1.7
6,785,429	+				-0.4
6,785,429	+				+0.6
6,785,429	+				+0.5
6,785,430	-				+0.5
6,785,430	-				-0.2
6,785,437	+				-1.2
6,785,437	+				+0.3
6,785,437	+				+0.1
6,785,437	+				+0.2
6,785,437	+				-1.4
6,785,438	-				-0.1
6,785,438	-				+0.3
6,785,438	-				+0.5
6,785,439	+				+0.6
6,785,439	+				-1.0
6,785,467	+				+1.0
6,785,467	+				+0.2
6,785,468	-				+0.3
6,785,486	+				-0.5
6,785,487	-				-0.1
6,785,576	+				+0.3
6,785,576	+				+0.2
6,785,576	+				-0.1
6,785,576	+				+0.1
6,785,576	+				+0.7
6,785,576	+				+0.2
6,785,576	+				+1.3
6,785,576	+				+0.3
6,785,576	+				-1.2
6,785,577	-				+1.6
6,786,250	+		Pf6N2E2_5967	0.74	-0.1
6,786,251	-		Pf6N2E2_5967	0.74	-0.5
6,786,253	-		Pf6N2E2_5967	0.74	-0.6
6,786,253	-		Pf6N2E2_5967	0.74	-0.6
6,786,278	-		Pf6N2E2_5967	0.77	-0.8
6,786,408	+				+1.2
6,786,409	-				+0.2
6,786,409	-				+0.0
6,786,454	+				-0.8
6,786,454	+				-0.2
6,786,454	+				+0.7
6,786,455	-				+0.3
6,786,455	-				-0.3
6,786,468	-				+0.4
6,786,543	+				+0.5
6,786,543	+				+0.4
6,786,544	-				-0.6
6,786,640	+				-0.1
6,786,640	+				-0.8
6,786,640	+				-0.2
6,786,641	-				+0.8
6,786,818	-		Pf6N2E2_5968	0.18	+0.1
6,787,035	+		Pf6N2E2_5968	0.39	+0.4
6,787,035	+		Pf6N2E2_5968	0.39	-0.1
6,787,036	-		Pf6N2E2_5968	0.39	-0.8
6,787,036	-		Pf6N2E2_5968	0.39	+0.6
6,787,036	-		Pf6N2E2_5968	0.39	+0.4
6,787,041	-		Pf6N2E2_5968	0.40	+0.6
6,787,041	-		Pf6N2E2_5968	0.40	-0.2
6,787,041	-		Pf6N2E2_5968	0.40	+1.1
6,787,041	-		Pf6N2E2_5968	0.40	+0.2
6,787,133	+		Pf6N2E2_5968	0.49	-0.7
6,787,133	+		Pf6N2E2_5968	0.49	+1.2
6,787,133	+		Pf6N2E2_5968	0.49	+1.6
6,787,133	+		Pf6N2E2_5968	0.49	+0.4
6,787,134	-		Pf6N2E2_5968	0.49	-0.1
6,787,134	-		Pf6N2E2_5968	0.49	+0.1
6,787,151	+		Pf6N2E2_5968	0.51	+0.6
6,787,151	+		Pf6N2E2_5968	0.51	-0.6
6,787,151	+		Pf6N2E2_5968	0.51	-0.1
6,787,151	+		Pf6N2E2_5968	0.51	-0.2
6,787,151	+		Pf6N2E2_5968	0.51	-0.4
6,787,151	+		Pf6N2E2_5968	0.51	+0.4
6,787,152	-		Pf6N2E2_5968	0.51	+0.2
6,787,152	-		Pf6N2E2_5968	0.51	-0.1
6,787,152	-		Pf6N2E2_5968	0.51	-0.8
6,787,152	-		Pf6N2E2_5968	0.51	+0.2
6,787,152	-		Pf6N2E2_5968	0.51	+0.6
6,787,152	-		Pf6N2E2_5968	0.51	+0.3
6,787,152	-		Pf6N2E2_5968	0.51	-0.4
6,787,154	-		Pf6N2E2_5968	0.51	-2.2
6,787,238	+		Pf6N2E2_5968	0.59	-0.9
6,787,238	+		Pf6N2E2_5968	0.59	-0.5
6,787,239	-		Pf6N2E2_5968	0.60	-0.8
6,787,239	-		Pf6N2E2_5968	0.60	+1.5