Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5633

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
6,446,984	-				+0.5
6,446,984	-				-0.9
6,446,995	+				+0.3
6,446,995	+				+0.3
6,446,995	+				-0.2
6,446,996	-				+0.7
6,446,996	-				+0.5
6,447,014	+				-0.7
6,447,103	-				+0.7
6,447,103	-				-0.2
6,447,103	-				-0.1
6,447,183	+				+0.0
6,447,184	-				+0.6
6,447,221	+				-0.2
6,447,225	+				+0.6
6,447,225	+				+0.1
6,447,225	+				+1.2
6,447,225	+				-0.4
6,447,226	-				-0.1
6,447,226	-				+0.5
6,447,226	-				-0.3
6,447,229	+				+0.6
6,447,229	+				-0.7
6,447,230	-				+0.6
6,447,230	-				-0.1
6,447,356	+				+0.5
6,447,469	-				-0.6
6,447,469	-				-0.7
6,447,469	-				+0.2
6,447,667	+				+0.3
6,447,667	+				+1.0
6,447,668	-				+2.6
6,447,668	-				+0.0
6,447,668	-				-0.1
6,447,780	-		Pf6N2E2_5632	0.32	-0.6
6,447,780	-		Pf6N2E2_5632	0.32	+0.8
6,447,780	-		Pf6N2E2_5632	0.32	-0.9
6,447,780	-		Pf6N2E2_5632	0.32	-0.2
6,447,809	+		Pf6N2E2_5632	0.50	-0.3
6,447,809	+		Pf6N2E2_5632	0.50	-1.1
6,447,809	+		Pf6N2E2_5632	0.50	-1.1
6,448,177	+		Pf6N2E2_5633	0.18	-0.1
6,448,177	+		Pf6N2E2_5633	0.18	-0.3
6,448,177	+		Pf6N2E2_5633	0.18	-0.1
6,448,178	-		Pf6N2E2_5633	0.18	-0.7
6,448,178	-		Pf6N2E2_5633	0.18	-0.4
6,448,228	+		Pf6N2E2_5633	0.22	-0.7
6,448,228	+		Pf6N2E2_5633	0.22	-1.1
6,448,228	+		Pf6N2E2_5633	0.22	+0.4
6,448,229	-		Pf6N2E2_5633	0.22	-0.8
6,448,229	-		Pf6N2E2_5633	0.22	-0.7
6,448,270	+		Pf6N2E2_5633	0.25	-0.3
6,448,270	+		Pf6N2E2_5633	0.25	-0.9
6,448,270	+		Pf6N2E2_5633	0.25	-0.2
6,448,270	+		Pf6N2E2_5633	0.25	+0.1
6,448,271	-		Pf6N2E2_5633	0.25	-0.5
6,448,271	-		Pf6N2E2_5633	0.25	+1.2
6,448,271	-		Pf6N2E2_5633	0.25	+0.2
6,448,271	-		Pf6N2E2_5633	0.25	-0.1
6,448,271	-		Pf6N2E2_5633	0.25	-0.2
6,448,271	-		Pf6N2E2_5633	0.25	+0.1
6,448,271	-		Pf6N2E2_5633	0.25	-1.2
6,448,271	-		Pf6N2E2_5633	0.25	-0.7
6,448,279	+		Pf6N2E2_5633	0.25	-0.5
6,448,280	-		Pf6N2E2_5633	0.25	-1.9
6,448,438	+		Pf6N2E2_5633	0.36	-0.3
6,448,438	+		Pf6N2E2_5633	0.36	-0.9
6,448,438	+		Pf6N2E2_5633	0.36	-0.4
6,448,438	+		Pf6N2E2_5633	0.36	-1.2
6,448,439	-		Pf6N2E2_5633	0.36	-0.7
6,448,439	-		Pf6N2E2_5633	0.36	-0.4
6,448,439	-		Pf6N2E2_5633	0.36	-0.6
6,448,439	-		Pf6N2E2_5633	0.36	-0.5
6,448,648	+		Pf6N2E2_5633	0.51	-0.6
6,448,649	-		Pf6N2E2_5633	0.51	+0.2
6,448,667	-		Pf6N2E2_5633	0.53	-1.2
6,448,747	+		Pf6N2E2_5633	0.58	-0.0
6,448,748	-		Pf6N2E2_5633	0.58	-0.9
6,448,748	-		Pf6N2E2_5633	0.58	-0.5
6,448,806	+		Pf6N2E2_5633	0.62	-1.8
6,448,807	-		Pf6N2E2_5633	0.62	+0.1
6,448,846	+		Pf6N2E2_5633	0.65	-0.1
6,448,846	+		Pf6N2E2_5633	0.65	+0.6
6,448,847	-		Pf6N2E2_5633	0.65	-0.5
6,448,861	+		Pf6N2E2_5633	0.66	-0.5
6,448,861	+		Pf6N2E2_5633	0.66	-0.7
6,448,861	+		Pf6N2E2_5633	0.66	-0.4
6,448,861	+		Pf6N2E2_5633	0.66	-0.7
6,448,861	+		Pf6N2E2_5633	0.66	-0.4
6,448,861	+		Pf6N2E2_5633	0.66	-0.5
6,448,861	+		Pf6N2E2_5633	0.66	-0.9
6,448,862	-		Pf6N2E2_5633	0.66	-0.7
6,448,862	-		Pf6N2E2_5633	0.66	+0.3
6,448,862	-		Pf6N2E2_5633	0.66	+0.2
6,448,862	-		Pf6N2E2_5633	0.66	-0.2
6,448,875	+		Pf6N2E2_5633	0.67	-0.8
6,448,875	+		Pf6N2E2_5633	0.67	-1.1
6,448,875	+		Pf6N2E2_5633	0.67	-0.1
6,448,875	+		Pf6N2E2_5633	0.67	-1.0
6,448,876	-		Pf6N2E2_5633	0.67	-0.1
6,448,876	-		Pf6N2E2_5633	0.67	-0.3
6,448,876	-		Pf6N2E2_5633	0.67	+0.7
6,448,876	-		Pf6N2E2_5633	0.67	-0.2
6,448,876	-		Pf6N2E2_5633	0.67	+0.2
6,448,876	-		Pf6N2E2_5633	0.67	+2.3
6,448,876	-		Pf6N2E2_5633	0.67	-0.1
6,448,876	-		Pf6N2E2_5633	0.67	-0.6
6,448,876	-		Pf6N2E2_5633	0.67	-0.7
6,449,002	+		Pf6N2E2_5633	0.76	-1.1
6,449,002	+		Pf6N2E2_5633	0.76	-0.3
6,449,002	+		Pf6N2E2_5633	0.76	+0.2
6,449,002	+		Pf6N2E2_5633	0.76	-0.5
6,449,002	+		Pf6N2E2_5633	0.76	-0.9
6,449,083	+		Pf6N2E2_5633	0.82	-1.9
6,449,083	+		Pf6N2E2_5633	0.82	-0.1
6,449,167	+		Pf6N2E2_5633	0.88	-0.6
6,449,167	+		Pf6N2E2_5633	0.88	-0.8
6,449,167	+		Pf6N2E2_5633	0.88	-0.7
6,449,167	+		Pf6N2E2_5633	0.88	-0.3
6,449,167	+		Pf6N2E2_5633	0.88	-0.7
6,449,167	+		Pf6N2E2_5633	0.88	-0.5
6,449,167	+		Pf6N2E2_5633	0.88	-0.1
6,449,167	+		Pf6N2E2_5633	0.88	-0.5
6,449,168	-		Pf6N2E2_5633	0.88	-0.8
6,449,168	-		Pf6N2E2_5633	0.88	-0.7
6,449,168	-		Pf6N2E2_5633	0.88	+0.3
6,449,168	-		Pf6N2E2_5633	0.88	-0.1
6,449,168	-		Pf6N2E2_5633	0.88	-0.3
6,449,338	+				+0.5
6,449,355	-				-0.0
6,449,355	-				+1.6
6,449,378	+				-1.5
6,449,482	+				-0.2
6,449,483	-				-0.4
6,449,483	-				-0.1
6,449,574	-				-0.3
6,449,832	+		Pf6N2E2_5634	0.37	+0.4
6,449,832	+		Pf6N2E2_5634	0.37	-1.1
6,449,833	-		Pf6N2E2_5634	0.37	-0.1
6,449,833	-		Pf6N2E2_5634	0.37	+0.1
6,449,833	-		Pf6N2E2_5634	0.37	-0.0
6,449,833	-		Pf6N2E2_5634	0.37	-0.0
6,449,871	-		Pf6N2E2_5634	0.46	-0.2
6,449,871	-		Pf6N2E2_5634	0.46	+0.1
6,449,884	+		Pf6N2E2_5634	0.50	+0.3
6,449,884	+		Pf6N2E2_5634	0.50	+0.2
6,449,885	-		Pf6N2E2_5634	0.50	+0.6
6,449,885	-		Pf6N2E2_5634	0.50	+0.1
6,449,885	-		Pf6N2E2_5634	0.50	-1.3
6,449,885	-		Pf6N2E2_5634	0.50	+0.0
6,450,091	-				+0.2
6,450,091	-				-1.2
6,450,091	-				+0.2
6,450,133	-				-0.0
6,450,138	+				-0.2
6,450,138	+				-0.5
6,450,138	+				+0.6
6,450,138	+				+0.1
6,450,138	+				+0.1
6,450,138	+				-0.1
6,450,138	+				-0.1
6,450,139	-				-0.0
6,450,270	+		Pf6N2E2_5635	0.15	+0.3
6,450,271	-		Pf6N2E2_5635	0.15	+0.3