Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5499
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
6,316,646 | - | Pf6N2E2_5498 | 0.27 | +0.4 | |
6,316,678 | + | Pf6N2E2_5498 | 0.30 | -0.2 | |
6,316,679 | - | Pf6N2E2_5498 | 0.30 | -0.4 | |
6,316,679 | - | Pf6N2E2_5498 | 0.30 | +0.2 | |
6,316,795 | + | Pf6N2E2_5498 | 0.39 | +0.4 | |
6,316,795 | + | Pf6N2E2_5498 | 0.39 | -0.2 | |
6,316,795 | + | Pf6N2E2_5498 | 0.39 | -0.0 | |
6,316,796 | - | Pf6N2E2_5498 | 0.39 | +0.6 | |
6,316,796 | - | Pf6N2E2_5498 | 0.39 | -1.0 | |
6,317,092 | + | Pf6N2E2_5498 | 0.61 | -0.4 | |
6,317,093 | - | Pf6N2E2_5498 | 0.61 | +0.2 | |
6,317,093 | - | Pf6N2E2_5498 | 0.61 | -0.0 | |
6,317,114 | - | Pf6N2E2_5498 | 0.63 | +0.3 | |
6,317,418 | + | Pf6N2E2_5498 | 0.85 | -0.3 | |
6,317,666 | - | Pf6N2E2_5499 | 0.38 | -0.6 | |
6,317,744 | - | -0.1 | |||
6,317,744 | - | -0.9 | |||
6,317,785 | + | -0.3 | |||
6,318,049 | + | Pf6N2E2_5500 | 0.26 | -0.1 | |
6,318,050 | - | Pf6N2E2_5500 | 0.26 | -1.1 | |
6,318,276 | - | Pf6N2E2_5500 | 0.49 | +0.2 | |
6,318,491 | + | Pf6N2E2_5500 | 0.70 | -0.9 | |
6,318,491 | + | Pf6N2E2_5500 | 0.70 | +0.4 |
Or see this region's nucleotide sequence