Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2397
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,835,198 | + | Pf6N2E2_2396 | 0.27 | +0.1 | |
2,835,198 | + | Pf6N2E2_2396 | 0.27 | -0.9 | |
2,835,198 | + | Pf6N2E2_2396 | 0.27 | +0.9 | |
2,835,199 | - | Pf6N2E2_2396 | 0.27 | -1.0 | |
2,835,302 | + | Pf6N2E2_2396 | 0.35 | -1.4 | |
2,835,303 | - | Pf6N2E2_2396 | 0.35 | +0.2 | |
2,835,303 | - | Pf6N2E2_2396 | 0.35 | +0.1 | |
2,835,303 | - | Pf6N2E2_2396 | 0.35 | -0.6 | |
2,835,723 | + | Pf6N2E2_2396 | 0.67 | +0.1 | |
2,836,265 | - | Pf6N2E2_2397 | 0.15 | -1.0 | |
2,836,443 | + | Pf6N2E2_2397 | 0.41 | -0.4 | |
2,836,444 | - | Pf6N2E2_2397 | 0.41 | +0.1 | |
2,836,444 | - | Pf6N2E2_2397 | 0.41 | -1.3 | |
2,836,846 | + | -0.7 | |||
2,836,847 | - | +0.8 | |||
2,836,847 | - | -0.1 | |||
2,836,847 | - | -0.2 | |||
2,836,865 | + | +0.1 | |||
2,836,865 | + | -0.6 | |||
2,836,865 | + | -0.6 | |||
2,836,866 | - | -0.2 | |||
2,836,870 | + | +1.6 | |||
2,836,871 | - | -0.3 | |||
2,836,871 | - | +0.5 | |||
2,836,871 | - | -0.8 | |||
2,836,897 | + | +0.0 | |||
2,837,006 | + | -0.4 | |||
2,837,014 | + | +0.4 |
Or see this region's nucleotide sequence