Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1905

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,257,299	+		Pf6N2E2_1904	0.69	+0.4
2,257,299	+		Pf6N2E2_1904	0.69	-1.3
2,257,309	+		Pf6N2E2_1904	0.69	+0.1
2,257,326	+		Pf6N2E2_1904	0.70	+0.4
2,257,326	+		Pf6N2E2_1904	0.70	+0.1
2,257,443	+		Pf6N2E2_1904	0.75	+0.5
2,257,444	-		Pf6N2E2_1904	0.75	+0.9
2,257,444	-		Pf6N2E2_1904	0.75	-0.4
2,257,541	+		Pf6N2E2_1904	0.80	+0.0
2,257,542	-		Pf6N2E2_1904	0.80	+0.1
2,257,584	+		Pf6N2E2_1904	0.81	-1.1
2,257,584	+		Pf6N2E2_1904	0.81	-0.4
2,257,584	+		Pf6N2E2_1904	0.81	+1.1
2,257,585	-		Pf6N2E2_1904	0.81	-0.1
2,257,585	-		Pf6N2E2_1904	0.81	+0.5
2,257,585	-		Pf6N2E2_1904	0.81	-0.2
2,257,691	+		Pf6N2E2_1904	0.86	+0.1
2,257,692	-		Pf6N2E2_1904	0.86	-0.6
2,257,692	-		Pf6N2E2_1904	0.86	-0.1
2,257,692	-		Pf6N2E2_1904	0.86	-0.3
2,257,754	-		Pf6N2E2_1904	0.89	-0.5
2,258,002	+				-0.2
2,258,002	+				+0.9
2,258,002	+				+0.8
2,258,003	-				+0.8
2,258,003	-				-0.5
2,258,064	-				+0.8
2,258,174	-				+0.4
2,258,174	-				-0.0
2,258,175	+				+0.8
2,258,175	+				+1.0
2,258,176	-				+1.9
2,258,176	-				+0.4
2,258,475	+		Pf6N2E2_1905	0.77	-0.7
2,258,475	+		Pf6N2E2_1905	0.77	-0.6
2,258,476	-		Pf6N2E2_1905	0.77	-0.2
2,258,476	-		Pf6N2E2_1905	0.77	+0.2
2,258,476	-		Pf6N2E2_1905	0.77	-0.9
2,258,516	+		Pf6N2E2_1905	0.86	-0.2
2,258,516	+		Pf6N2E2_1905	0.86	-0.2
2,258,528	-		Pf6N2E2_1905	0.89	+0.1
2,258,550	+				+0.9
2,258,550	+				+0.3
2,258,551	-				-0.3
2,258,551	-				+1.1
2,258,551	-				-0.6
2,258,564	+				-0.6
2,258,581	+				+1.1
2,258,582	-				-0.2
2,258,582	-				+0.2
2,258,582	-				+0.1
2,258,582	-				+0.2
2,258,583	-				+0.6
2,258,691	-				+0.9
2,258,706	+				-0.4
2,258,762	+				-0.9
2,258,763	-				+0.1
2,258,763	-				-0.7
2,258,778	-				-0.3
2,258,781	+				+0.6
2,258,815	-				-0.3
2,258,898	-				-1.1
2,258,969	+				+0.0
2,258,970	-				-0.5
2,258,995	-				+0.0
2,259,009	+		Pf6N2E2_1906	0.11	-0.6
2,259,051	-		Pf6N2E2_1906	0.14	+0.4
2,259,051	-		Pf6N2E2_1906	0.14	+0.2
2,259,051	-		Pf6N2E2_1906	0.14	-0.5
2,259,076	+		Pf6N2E2_1906	0.15	-0.0
2,259,076	+				+0.4
2,259,077	-		Pf6N2E2_1906	0.16	+0.8
2,259,077	-		Pf6N2E2_1906	0.16	-0.3
2,259,077	-		Pf6N2E2_1906	0.16	+0.6
2,259,080	+		Pf6N2E2_1906	0.16	+0.1
2,259,080	+		Pf6N2E2_1906	0.16	+0.2
2,259,080	+		Pf6N2E2_1906	0.16	+1.4
2,259,081	-		Pf6N2E2_1906	0.16	-0.9
2,259,081	-		Pf6N2E2_1906	0.16	+0.9
2,259,081	-		Pf6N2E2_1906	0.16	+0.2
2,259,081	-		Pf6N2E2_1906	0.16	+1.6
2,259,081	-		Pf6N2E2_1906	0.16	+0.7
2,259,186	+		Pf6N2E2_1906	0.23	-0.7
2,259,187	-		Pf6N2E2_1906	0.23	-0.2
2,259,187	-		Pf6N2E2_1906	0.23	+0.5
2,259,187	-		Pf6N2E2_1906	0.23	-0.8
2,259,187	-		Pf6N2E2_1906	0.23	+0.5
2,259,308	-		Pf6N2E2_1906	0.31	+0.7
2,259,308	-		Pf6N2E2_1906	0.31	-0.1
2,259,308	-		Pf6N2E2_1906	0.31	-0.3
2,259,308	-		Pf6N2E2_1906	0.31	-0.5
2,259,308	-		Pf6N2E2_1906	0.31	+0.4
2,259,308	-		Pf6N2E2_1906	0.31	-0.3
2,259,308	-		Pf6N2E2_1906	0.31	+0.7
2,259,308	-		Pf6N2E2_1906	0.31	+1.0
2,259,308	-		Pf6N2E2_1906	0.31	-1.1
2,259,308	-		Pf6N2E2_1906	0.31	-0.7
2,259,319	+		Pf6N2E2_1906	0.32	-0.1
2,259,319	+		Pf6N2E2_1906	0.32	+0.7
2,259,319	+		Pf6N2E2_1906	0.32	-0.7
2,259,319	+		Pf6N2E2_1906	0.32	+0.1
2,259,319	+		Pf6N2E2_1906	0.32	+0.1
2,259,319	+		Pf6N2E2_1906	0.32	+0.0
2,259,319	+		Pf6N2E2_1906	0.32	+0.0
2,259,319	+		Pf6N2E2_1906	0.32	+0.1
2,259,319	+		Pf6N2E2_1906	0.32	-0.6
2,259,320	-		Pf6N2E2_1906	0.32	-0.4
2,259,320	-		Pf6N2E2_1906	0.32	+0.0
2,259,320	-		Pf6N2E2_1906	0.32	+0.8
2,259,553	-		Pf6N2E2_1906	0.48	+1.4